Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000961115.1_202015-03-24] 5,784 sequences; 32,721,549 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq1476 91.5 1e-13 >seq1476 Length=9414 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| || | || |||||| || | || || || || | |||||||| | Sbjct 9071 CCACCACGAAGACGTAGCACCAAGTGCAACGTTGATTCTTTCTGGATGTTGTAATCCGCA 9130 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | || ||| |||| || | |||||| ||||| || |||| || || ||||| | || Sbjct 9131 AGCGTTCGTCCGTCTTCTAGTTGTTTACCGGCGAAGATCAGACGTTGCTGATCAGGAGGA 9190 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||| || || |||| | | || || || ||| ||||| | |||||| Sbjct 9191 ATTCCTTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCAATAGTGTCTGATGACTCGACT 9250 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110 || | |||||||||||||| || | ||||||||||| || |||||| Sbjct 9251 TCCAAAGTTATAGTTTTTCCAGTCAAGGTTTTCACAAATATCTGCATT 9298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381342716303472