Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000961115.1_202015-03-24] 5,784 sequences; 32,721,549 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq3351 105 1e-17 >seq3351 Length=46634 Score = 105 bits (116), Expect = 1e-17 Identities = 135/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 98040 TACAAGACTGTCTGGGAGATTCCGACCAAGACGCTGATCGATATGGCTGCCGACAGAGGT 98099 ||||| || || ||||| || | ||| || | | || ||||||||||| |||| Sbjct 39367 TACAAAACAGTTTGGGAAATCAAGCAAAAGGCGATTTTGGACATGGCTGCCGATCGAGGA 39426 Query 98100 GTCTACATTGACCAGAGTCAATCGTTCAATCTGTACGTTGCCGAGCCCACCTACAGTCGT 98159 | |||||| ||||||||||| | ||| | || ||||||| || || |||| Sbjct 39427 GCGTACATTTGTCAGAGTCAATCACTAAATATTCACATTGCCGACCCGACTGTCAGTAAA 39486 Query 98160 ATGACTTCGATACACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATGTACTATCTG 98219 | |||||||| || || ||||||||||| || || |||||||| || ||||||||||| Sbjct 39487 CTCACTTCGATGCATTTCTACGCATGGAAAAAAGGTCTCAAGACAGGAATGTACTATCTC 39546 Query 98220 AGAACA 98225 ||||| Sbjct 39547 CGAACA 39552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741005621419840