Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000961115.1_202015-03-24] 5,784 sequences; 32,721,549 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq1476 84.2 2e-11 >seq1476 Length=9414 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCT 48581 |||||| || ||| || |||||||||||||| | ||| || || |||| ||||| | Sbjct 8866 ATGAAGCGTAGACTCTTTCTGAATGTTGTAATCCG-CAAGCGTGCGTCCGTCTTCCAGTT 8924 Query 48582 GCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTT 48641 | |||||| | |||||| ||| ||||| || || | | ||| |||||| |||| Sbjct 8925 GTTTACCGGCAAAAATTAGACGTTGCTGGTCTGGAGGAATCCCTTCTTTGTCCTGGATTT 8984 Query 48642 TCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGG 48701 || ||| | | | || ||||| | ||| ||| || | || || ||||| || | Sbjct 8985 TCGCCTTCACATTGTCGATAGTATCTGAAGATTCCACTTCCAACGTAATAGTTTTCCCAG 9044 Query 48702 TGAGAGTTTTCACAAAAATCTGCAT 48726 | || || || |||||||| ||||| Sbjct 9045 TCAGCGTCTTAACAAAAATTTGCAT 9069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421221504949784