Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000961115.1_202015-03-24] 5,784 sequences; 32,721,549 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq1503 260 2e-64 seq3351 215 7e-51 >seq1503 Length=45688 Score = 260 bits (288), Expect = 2e-64 Identities = 439/626 (70%), Gaps = 11/626 (2%) Strand=Plus/Plus Query 32653 ACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAA 32712 |||||| |||||| || || || ||||| || || || | ||| || | || || |||| Sbjct 34285 ACATCAGACATGCAAAGTCACAATGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAA 34344 Query 32713 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGATCCA 32771 | ||||| ||||| | || || || || ||||||||||| || ||| |||||||| Sbjct 34345 AGCAAAGTCCAGGCATCAATCCTCGTTTCTTCAGCCAAAATATAGA-GCAGAATGATCCG 34403 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTG 32831 || || || |||||||| || ||||||||||| | | ||| ||| || | ||| Sbjct 34404 GAGAAAAAGATTCCTTCGACGGCCGCAAAGGCTACCACTCTTTCTGCAAACGAGGCATAC 34463 Query 32832 TCATGTATC-CACT-TTTGA--GCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTC 32887 | || ||| ||| ||| | ||||| | || || || | || || || ||||| || Sbjct 34464 TT-TGGATCGCACCATTTCAACGCCCATTGTGCTTTATTGGTAACGCACGGGATTGTTTC 34522 Query 32888 TATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAG 32947 || || | | || | ||||||| | |||||| | |||||||||||||| | Sbjct 34523 AATCGCGCACAGTAAATGCTGTTTTTCAGTTGGATCTTTGATGTATGTATCAATCAATAA 34582 Query 32948 ACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGC 33007 ||||| |||||| || || ||||| || || |||||||||||||| ||||||| ||| Sbjct 34583 CGAATACACTTCCGAGTGTATATTTTCTATTGCAATTTGAAATCCGTAAAAGCATCGAGC 34642 Query 33008 CTCGGTAATCTGTACTTCTGTAC--AAAATCGTTCTGCTAAATTTTCATTCACTATTCCG 33065 |||| ||||| || || | | ||| || | || | ||||||||| || ||||| Sbjct 34643 TTCGGGGATCTGAACCTCACTGCTGAAATTCATG--GCGAGATTTTCATTGACAATTCCA 34700 Query 33066 TCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT 33125 |||||||||||||| || ||||| || ||||| ||||| | | |||| | | || Sbjct 34701 TCACTGGCTGCAAAGAAGGCCAACACGTGTTTGATAAAGTGTCTTTCATTGTCCGATATA 34760 Query 33126 TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCC 33185 ||| ||| ||||| || || | | ||| | |||||| | |||||||| |||| Sbjct 34761 TTAAGCCAGTCATTCATGTCATGCACCAAATCGATTTCTTCTGCGGTCCAAAAGCTTGCC 34820 Query 33186 TCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTA 33245 ||||| || |||||||| | ||| || ||| | ||| || ||||| | ||||| | Sbjct 34821 TCTGCTTTCTTATACATGTCCCAAATCTCAGATTGTTGTATCGGAAATAAGACAAAGCGG 34880 Query 33246 TTTGGATTTTTTGCAAGGATTGGTTC 33271 || ||||||| | ||| | ||||| Sbjct 34881 TTCGGATTTTCTCGAAGAAAAGGTTC 34906 >seq3351 Length=46634 Score = 215 bits (238), Expect = 7e-51 Identities = 1402/2243 (63%), Gaps = 38/2243 (2%) Strand=Plus/Minus Query 61880 GTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTC 61939 || || |||||||||||||| || || ||||| ||||| |||| |||||||| Sbjct 39551 GTTCGGAGATAGTACATTCCTGTCTTGAGACCTTTTTTCCATGCGTAGAAATGCATCGAA 39492 Query 61940 GTTAGTTTGGAATAAC--TCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGA 61997 || ||||| | | || |||| || || || || ||||| | |||||||| ||| | Sbjct 39491 GTGAGTTT--ACTGACAGTCGGGTCGGCAATGTGAATATTTAGTGATTGACTCTGACAAA 39434 Query 61998 TGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAG 62057 || | ||||| | || |||||||| | | ||||| |||||| |||||||||| | Sbjct 39433 TGTACGCTCCTCGATCGGCAGCCATGTCCAAAATCGCCTTTTGCTTGATTTCCCAAACTG 39374 Query 62058 TTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCAT 62114 |||| || | || | || |||| | | |||| || | ||| || | || Sbjct 39373 TTTTGTACTTTTCTTTCACATGAGGCGGAATTTCAGCGATATTTTGTACGGAACCGCGAT 39314 Query 62115 CTGCCATAATCCTATTCTTGATCTCATCAT-TCCATAATTTTCTCTCGGTTAAAACTCTA 62173 | | || |||| | || | || |||| || || |||| | || |||| Sbjct 39313 CGCGAAGGATTTGATTCCGAACGTC-TGATGTCCACAAATTCATCTCAAT--AAGCTCTT 39257 Query 62174 --AGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATAT 62231 | ||||| || || | | ||||||||||| | || | ||| || | || | Sbjct 39256 CCATGAGATATTTGTTGACAATTGTAAATTCTCCAGCGAGGACGCGTCGATTGAACATGT 39197 Query 62232 TACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCG 62291 | || |||| || | |||||| ||| || | ||||||||| ||||| || || | Sbjct 39196 TGGAAGTGAACGGCTCGATAGACTCGCAATTGCCGAGAATTTGAGCCGTTGAGGCGGTTG 39137 Query 62292 GCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAG 62351 |||| || || | || ||| |||| | |||| || | || ||||| | Sbjct 39136 GCATCGGAGCGAGCAGCAAAGAGTTTCGGATTCCGTGAGTAGCTACTTGCTCTTTCAACT 39077 Query 62352 GTTCCCAATTCCAAAGATCCGAC---GGTACAACNNNNNNNNNNNNNNNTTGTAGAATAC 62408 | | ||||| ||| || | || || | || ||| | |||| Sbjct 39076 GCTTCCAATCCCATCGACCGGAATCGGGAATGACCTGCCACATATCAAATTGAAAGATAC 39017 Query 62409 CGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCAC 62468 | ||| | ||||| |||| | ||||| ||||| | | || | ||| Sbjct 39016 CTCGACTAACTGGTGATCCAGCATAGCTCTCGTACGGTCCGAGTTCCCGTGCCAATTCCA 38957 Query 62469 AACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCG 62528 || || | || || |||| || ||||| || || | || || || || | | Sbjct 38956 TGGAAGCTTCCATCGCCGCGAAATACATCGTTTCAAAAATTTCTTTGTTGAGCTCGCGAG 38897 Query 62529 CTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACAC 62588 | | ||| ||||||||| | | | || | ||||| || || | |||||||| | Sbjct 38896 CAGCTTTGCTTTCAAATGGAAGACTCATCAGTAAAAACGTATCGGCAAGACCTTGAACGC 38837 Query 62589 CAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAAT 62648 | || || || |||| ||||| || ||| | || ||||| ||||| |||||||||| Sbjct 38836 CGATTCCAATCGGTCGATGTCGCTGATTGCTCACTTGTGCTTCAGGAATCGGATAATAAT 38777 Query 62649 TAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGA 62708 | | ||| || ||||| ||||||||| | || | ||| | || | | ||| Sbjct 38776 TGAGATCAATGATTTTGTTGAGATTTTTCGTAACGATTTTTGTGATTTCGTATAATTTTG 38717 Query 62709 GAAAATCAAATCGCCCATCTATTACAAACATGTT--CAATGCAACAGATGCCAGATTACA 62766 ||| | |||| | ||| |||| | || || |||||| | || |||| ||| || Sbjct 38716 CAAATTGAAATT--CTTTCTGATACACAAATTTTGACAATGCGATGGAAGCCAAATTGCA 38659 Query 62767 AACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTT 62826 || || || || || | || | || | || || ||| ||| ||||| || | Sbjct 38658 TACTGCCACTTCTTTGGAGTCTGAGTACTCGATGATTTCACAGCAGAGATTGCTTGATCG 38599 Query 62827 GATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAA 62886 |||||||| | ||| || ||||| || ||||| || || || ||||| || | Sbjct 38598 AATGGTTCCAAGATTCTGCTGATTGGATTTACGATTACAAGCGTCTTTGTAAAGCATATA 38539 Query 62887 TGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACT-CGAGCCTTTA 62945 || || || || ||||||||| || | ||| || ||| | | | | | |||| Sbjct 38538 CGGCGTTCCGGTCTCAATCTGACTATCCAAAATGGCAAACCACA--ATTGCTGGGCTTTG 38481 Query 62946 TTATAGATTT---GTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGT 63002 | || || | | |||| ||||| | ||| || || || ||| Sbjct 38480 --ACAGTCTTTCGGGCAATGTTTTGAGACTCGTACTTTTCATATAACGCATCAAATTCGC 38423 Query 63003 CTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGT 63062 |||||| | | |||| ||| || | |||||| | || ||| ||| || Sbjct 38422 TTCCCCATGTCTCATAAAGTCGTGGAGCCTCGTTCGGACAGAATAAACTCCATTCTTGGT 38363 Query 63063 CATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGG 63122 || | ||| ||||||||||| ||||| || ||||||||||| ||| | ||||| | Sbjct 38362 TGTCTTCCACACGTTTCATAAACAGATCGGGGATCCAAAGAGCATAAAACAAATCTCGAG 38303 Query 63123 TTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAAT 63182 || ||| || ||||| |||||| || || || ||| | | ||||| | | Sbjct 38302 CTCGATGGAGTTCATTTCCATGATTCTTACGTAGTTCCAGAAACTCAAAGATATCCGCGT 38243 Query 63183 GCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGT 63242 |||| || || | || || || | | || ||| || || || ||||| | || Sbjct 38242 GCCAGGGCTCTAGATAAATTGCAAAAGACCCTTTCCGCTTCCCACCGCCTTGATCAACGT 38183 Query 63243 ATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGG 63302 ||| ||| |||| ||| | || | | |||||||| ||| ||||| || | ||||| | Sbjct 38182 ATCGAGCTGTGTCATTGAACACCCGAAGCATTGGAACAATTCCATTCGAACTTCCATTCG 38123 Query 63303 TCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTG 63362 |||| ||||| || ||| |||||||| ||| | || || || || | Sbjct 38122 TCCCGCGAATATAACTGTTGGTGGAGCGAATATTGGAAATACTGACGCCAATACCGCCAG 38063 Query 63363 CCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCAT 63422 || || || || | || ||| |||| | ||| || || ||||| || ||| ||||| Sbjct 38062 CCCACTTTGAAATACACGCACATTGTTTCAGCGTGTCGTAAATGCCGTCGATAGAATCAT 38003 Query 63423 CCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATA 63482 | |||| | ||||||||| || | |||| | ||| ||||||||||| || | Sbjct 38002 CTTGCATGGATAATAGAAAACACGACGATAATTGGGGTCGAGGCGTTCCCGCATTGAAAA 37943 Query 63483 AGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTG 63542 || |||| || || ||||| | |||| || | | | ||||| || | | | | Sbjct 37942 GCGTCGGAGTTGCATGCGTAAAGAACTTTTGTGACATGTGTTCATACGTTTCCAAAACGG 37883 Query 63543 AGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTT 63602 ||| | || | || || || || || || || ||||||| ||| || || || | || Sbjct 37882 CGTCCAAATTCTCTTTGTGTATGCCGACAGCCACTCGCATTATCATATGTTGTGGGCGTT 37823 Query 63603 CAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAAT 63662 || | || || | ||||| || ||||| |||| ||||||||| ||||||| Sbjct 37822 CACACACTTTTCCATTCACACGCAACAGATACGATTTCTCCAGAGTTTTAAAGCCAAAAT 37763 Query 63663 AGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGT 63722 ||| ||| |||||||| || ||||| | || ||||| || || | | Sbjct 37762 AGTCGTAATCAAAGTCTCTATCACCGATAATTGCGGAATTGAGAGCTTCTTTGTTCTCCA 37703 Query 63723 TAACTACATCCATGGTAATACTTG--AAATAATAGGAAAATG---TTTCCCATTTTTAGG 63777 |||| | || ||| || ||| | |||| ||| | ||| ||| | Sbjct 37702 TAAC-AATTCGATGCACATCGTTGGCGATTAAT-GGAGCGGGTACTTTGGTGGTTTCGTG 37645 Query 63778 ATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTG 63837 || | || ||||| | || |||||| || | ||| ||||| | ||| || Sbjct 37644 CTTATTTTCGTAAAATAA---TTGAATGTTTTCACTGAAGACTTTGTTTGTATTTTTATG 37588 Query 63838 TAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACA 63897 || ||| || | || |||| ||| || | ||| |||| ||||||||||| | || Sbjct 37587 TAAATTGGAAATAGCAATTCGAGCAGCCAATTTGGAGAAATCGGGATGTTGTGTGCTGCA 37528 Query 63898 AGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACCATTATATAT 63957 ||||| |||| ||||||| ||||||||| || || || || ||| | Sbjct 37527 GTAAGCTGCGGTTTCTGCTGCCAATTCGTCCAATTCCGATGTGGTGACGCCCGGATACAC 37468 Query 63958 TCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATA 64017 || || || ||| || ||||| | ||||| | | || ||||||||| || Sbjct 37467 GCCAGCAATCACTTTCTGAGATATTTGGACGGGATCAACGTATTCTGTGTTTAAGTTGTA 37408 Query 64018 ACATAATTTTCTAATACGAGATGTGATTTTATCAAACATGACATTTTCCTTGTATCCATT 64077 || | |||| | || || | |||||||| || || |||| ||| || ||| | Sbjct 37407 GCAGAGTTTTGTGATTCGCGCAGTGATTTTGTCGAATTTGACGACTTCTTTTCGTCCGTC 37348 Query 64078 TCGTTTAATGACAAACATTTTTG 64100 ||||| |||||| ||||||||| Sbjct 37347 ACGTTTGATGACATACATTTTTG 37325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633586188406400