Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000961115.1_202015-03-24] 5,784 sequences; 32,721,549 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq1503 120 6e-22 >seq1503 Length=45688 Score = 120 bits (132), Expect = 6e-22 Identities = 307/465 (66%), Gaps = 18/465 (4%) Strand=Plus/Minus Query 42412 TCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCA 42471 ||||| || | |||||||||| || ||| ||| || || |||||||| || || |||| Sbjct 34734 TCAAACACGTGTTGGCCTTCTTTGCAGCCAGTGATGGAATTGTCAATGAAAATCTCGCCA 34675 Query 42472 CCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAG 42531 | |||| | ||||| ||| | || || || ||||| ||||| || || || | Sbjct 34674 TGAATTTCAGCAGTGAGGTTCAGATCCCCGAAGCTCGATGCTTTTACGGATTTCAAATTG 34615 Query 42532 CCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATC 42591 | ||||| || | ||||| || ||||| | | || | | || |||||| |||| Sbjct 34614 CAATAGAAAATATACACTCGGAAGTGTATTCGTTATTGATTGATACATACATCAAAGATC 34555 Query 42592 CCGTCGAGCGTAACGGG-----CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAA 42646 | || ||| | |||| | || || || || || || ||| | | || Sbjct 34554 CAACTGAAA--AACAGCATTTACTGTGC---GCGATTGAAACAATCCCGTGCGTTACCAA 34500 Query 42647 GAAGGCGGACTGGGCGCTCAACTGG----ATCGAGAGTCCCGACGCAACGTTCGGCGAGA 42702 || || | |||||| | || ||| ||| | ||| | || |||| | || | Sbjct 34499 TAAAGCACAATGGGCGTTGAAATGGTGCGATCCAAAGT----ATGCCTCGTTTGCAGAAA 34444 Query 42703 GGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCT 42762 | ||||||||||| | |||||||| || ||||| ||||| || | ||| ||| || | Sbjct 34443 GAGTGGTAGCCTTTGCGGCCGTCGAAGGAATCTTTTTCTCCGGATCATTCTGCTCTATAT 34384 Query 42763 TCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCA 42822 | ||||| ||| | | | |||||| ||||| ||| || || || |||||||| Sbjct 34383 TTTGGCTGAAGAAACGAGGATTGATGCCTGGACTTTGCTTTTCAAATGAGCTCATCAGTC 34324 Query 42823 GGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGA 42867 | || || || || ||| | |||||||| || || ||| ||||| Sbjct 34323 GTGATGAAGGACTACATTGTGACTTTGCATGTCTGATGTACTCGA 34279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944270924275840