Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000961115.1_202015-03-24] 5,784 sequences; 32,721,549 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq1476 98.7 8e-16 >seq1476 Length=9414 Score = 98.7 bits (108), Expect = 8e-16 Identities = 159/223 (71%), Gaps = 8/223 (4%) Strand=Plus/Plus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGT-CG 33968 || || || |||||||||||||| ||| ||||||||||||||||| | ||| || || Sbjct 8852 AGACGAAGTACCAGATGAAGCGTAGACTCTTTCTGAATGTTGTAATCCG-CAAGCGTGCG 8910 Query 33969 CTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTC 34028 |||| |||| ||| || |||||||| || || || ||||| || || | | || Sbjct 8911 TCCGTCTTCCAGTTGTTTACCGGCAAAAATTAGACGTTGCTGGTCTGGAGGAATCCCTTC 8970 Query 34029 TTTGTCCATAATTTTTTGCTT--AATGGAACTC-ACACTATCAGTAGATTCGCATTCGAC 34085 ||||||| ||||| ||| || | || | | |||| | |||||| ||| | Sbjct 8971 TTTGTCCTGGATTTTCGCCTTCACATTG---TCGATAGTATCTGAAGATTCCACTTCCAA 9027 Query 34086 CGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128 ||| || ||||| || || || || || ||||| ||||||||| Sbjct 9028 CGTAATAGTTTTCCCAGTCAGCGTCTTAACAAAAATTTGCATT 9070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397034410078768