Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000961115.1_202015-03-24] 5,784 sequences; 32,721,549 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq3351 125 9e-24 seq1503 120 4e-22 >seq3351 Length=46634 Score = 125 bits (138), Expect = 9e-24 Identities = 323/484 (67%), Gaps = 11/484 (2%) Strand=Plus/Minus Query 114788 TCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAG 114847 || || ||||| ||||| || || || |||||||| ||||| | || | ||| ||| Sbjct 38360 TCTTCCACACGTTTCATAAACAGATCGGGGATCCAAAGAGCATAAAACAAATCTCGAGCT 38301 Query 114848 CGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGC 114907 ||| ||||| || ||||| ||| | |||| ||| || | ||||||||||||| Sbjct 38300 CGATGGAGTTCATTTCCATGATTCTTACGTAGTTCCAGAAACTCAAAGATATCCGCGTGC 38241 Query 114908 CACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTACATAC 114964 || || || || || | || | ||||| || || | ||| | || | || || Sbjct 38240 CAGGGCTCTAGATAAATTGCAAAAGACCCTTTCCGCTTCCCACCGCCTTGATCAACGTAT 38181 Query 114965 CTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTC 115024 | |||||| |||| || || ||||||||||||| || |||| || ||||| ||| Sbjct 38180 CGAGCTGTGTCATTGAACACCCGAAGCATTGGAACAATTCCATTCGAACTTCCATTCGTC 38121 Query 115025 CCCCGAATACGAGACTTATTGGCTCTGACATCATGGATGTGC--ATACCAATACCCCCTG 115082 || |||||| | || ||| | || || |||| | | | |||||||| || | Sbjct 38120 CCGCGAATATAACTGTTGGTGGAGC-GA-ATATTGGAAATACTGACGCCAATACCGCCAG 38063 Query 115083 CCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCAC 115142 |||||||||| || ||| || | | || || |||| || |||||||| || ||| Sbjct 38062 CCCACTTTGAAATACACGCACATTGTTTCAGCGTGTCGTAAATGCCGTCGATAGAATCA- 38004 Query 115143 CCTTATTTGCGATA--AGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAA 115200 ||| || |||| || || || ||| | ||| || | || || || || ||||| Sbjct 38003 TCTTGCATG-GATAATAGAAAACACGACGATAATTGGGGTCGAGGCGTTCCCGCATTGAA 37945 Query 115201 GAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTATCGTAGGTCTCCAAGAC 115260 || || || || || || | || | ||| ||||| | || || || ||||| || Sbjct 37944 AAGCGTCGGAGTTGCATGCGTAAAGAACTTTTGTGACATGTGTTCATACGTTTCCAAAAC 37885 Query 115261 GGCG 115264 |||| Sbjct 37884 GGCG 37881 >seq1503 Length=45688 Score = 120 bits (132), Expect = 4e-22 Identities = 268/398 (67%), Gaps = 6/398 (2%) Strand=Plus/Plus Query 126059 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCC 126118 || || || || ||||| |||||| ||||| || ||||| ||||| ||||| | || Sbjct 34308 TGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCAGGCATCAATCCT 34367 Query 126119 CGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACAC 126178 || ||||||| ||| || || | || ||||| || ||||| |||||||| || || | Sbjct 34368 CGTTTCTTCAGCCAAAATATAGAGCAGAATGATCCGGAGAAAAAGATTCCTTCGACGGCC 34427 Query 126179 GCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAACCACTTCATCGCC 126238 || || || | | | || ||||| ||| |||||| || |||| |||| |||| Sbjct 34428 GCAAAGGCTACCACTCTTTCTGCAAACGAGGCATACTTTGGATCGCACCATTTCAACGCC 34487 Query 126239 CACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAG-AGTTCCTTCTT 126297 || || || || || | ||||||| || | ||||| || || | | || || Sbjct 34488 CATTGTGCTTTATTGGTAACGCACGGGATTGTTTCAATCGCG-CACAGTAAATGCTGTTT 34546 Query 126298 TTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCAT 126357 ||| | ||||||||||||||| |||| || | | ||||| ||| ||| | | Sbjct 34547 TTCAGTTGGATCTTTGATGTATGTATCAATCAATAACGAATACACTTCCGAGTGTATATT 34606 Query 126358 TTCATTATGGCA--CTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCG 126415 ||| ||| ||| ||| | |||| || | || |||||| ||||| |||||| | Sbjct 34607 TTC--TATTGCAATTTGAAATCCGTAAAAGCATCGAGCTTCGGGGATCTGAACCTCACTG 34664 Query 126416 GCAAAATTGTTATTGATATTCTCAAAAACAATTCCATC 126453 ||||| | || ||| ||| ||||||||||| Sbjct 34665 CTGAAATTCATGGCGAGATTTTCATTGACAATTCCATC 34702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597310411334720