Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000961115.1_202015-03-24] 5,784 sequences; 32,721,549 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq3351 129 7e-25 seq1503 91.5 2e-13 >seq3351 Length=46634 Score = 129 bits (142), Expect = 7e-25 Identities = 243/352 (69%), Gaps = 13/352 (4%) Strand=Plus/Minus Query 110692 CGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGAT 110751 ||||| |||| ||| || | |||||||| |||||| || || ||||| | || | || Sbjct 38273 CGTAGTTCCAGAAACTCAAAGATATCCGCGTGCCAGGGCTCTAGATAAATTGCAAAAGAC 38214 Query 110752 CCCTTACGACGACC--CGCCTGGTT-AACATAGCGTGCTGTGGCATTGAAGACCCTGAGC 110808 || || || || ||||| | | ||| || || |||||| ||||||| |||| ||| Sbjct 38213 CCTTTCCGCTTCCCACCGCCTTGATCAACGTATCGAGCTGTGTCATTGAACACCCGAAGC 38154 Query 110809 ATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATT---CTGGACTTATTGGCA 110865 || |||| |||||||| || ||||| || || | ||| ||| || ||| Sbjct 38153 ATTGGAACAATTCCATTCGAACTTCCATTCGTCCCGCGAATATAACTG---TTGGTGGAG 38097 Query 110866 CGAATGTCGTGGATATGCATAC--CAATACCACCCGCCCACTTACTAATTTGTGCACACT 110923 ||||| | |||| || | || ||||||| || |||||||| ||| ||||| | Sbjct 38096 CGAATAT--TGGAAATACTGACGCCAATACCGCCAGCCCACTTTGAAATACACGCACATT 38039 Query 110924 CTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAG 110983 | | || || | ||||| || || || ||||| | | ||| | |||||| || | Sbjct 38038 GTTTCAGCGTGTCGTAAATGCCGTCGATAGAATCATCTTGCATGGATAATAGAAAACACG 37979 Query 110984 AAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATG 111035 | || | || || |||||||||||||||||||| || || || || ||||| Sbjct 37978 ACGATAATTGGGGTCGAGGCGTTCCCGCATTGAAAAGCGTCGGAGTTGCATG 37927 >seq1503 Length=45688 Score = 91.5 bits (100), Expect = 2e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 119496 GCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCA 119555 ||||| || ||| || |||||||| ||| |||||||||||| |||||||||||| Sbjct 34296 GCAAAGTCACAATGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCA 34355 Query 119556 GGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATG 119615 ||||| | ||||| |||||| |||||||| || | || || ||| || || ||||| Sbjct 34356 GGCATCAATCCTCGTTTCTTCAGCCAAAATATAGAGCAGAATGATCCGGAGAAAAAGATT 34415 Query 119616 CCCTCCAC 119623 || || || Sbjct 34416 CCTTCGAC 34423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588933417035200