Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000961115.1_202015-03-24] 5,784 sequences; 32,721,549 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq3351 168 8e-37 seq1503 140 4e-28 >seq3351 Length=46634 Score = 168 bits (186), Expect = 8e-37 Identities = 680/1054 (65%), Gaps = 38/1054 (4%) Strand=Plus/Minus Query 106279 ATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAG--ACTTTCGC 106336 ||| || ||||||||||| || | ||||| |||| |||||| ||| |||| || Sbjct 38856 ATCGGCAAGACCTTGAACGCCGATTCCAATCGGTCGATGTCGCTGATTGCTCACTTGTGC 38797 Query 106337 G-CAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAAT 106395 ||| || |||||| |||| ||||||| | ||| |||||||| ||||| || Sbjct 38796 TTCAGG---AATCGGATAATAATTGAGATCAATGATTTTGTTGAGATTTTTCGTAACGAT 38740 Query 106396 CTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTT 106455 ||||||||||| | | |||| || | | ||| | | | ||| || ||| | || Sbjct 38739 TTTTGTGATTTCGTATAATTTTGCAAATTGAAA--TTC---TTTCTG-ATACACAAATTT 38686 Query 106456 TGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAA 106515 || | ||||| || ||||||||||| || ||| || | |||| |||||| | Sbjct 38685 TGACAATGCGATGGAAGCCAAATTGCATACTGCCACTTCTTTGGAGTCTGAGTACTCGAT 38626 Query 106516 AATTTCTGTACACAAGTTG---GAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTT 106572 ||||| || | ||| || | ||| || || | ||||| || || || Sbjct 38625 GATTTCACAGCAGAGATTGCTTGATCG---AATGGTTCCAAGATTCTGCTGATTGGATTT 38569 Query 106573 TTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAG 106632 || || || || ||||| ||||| || ||||| || ||||| |||| | | Sbjct 38568 ACGATTACAAGCGTCTTTGTAAAGCATATACGGCGTTCCGGTCTCAATCTGACTATCCAA 38509 Query 106633 AATTGCCTTCCACACATCGGCGGCTGGTACAATGGCGTT--GGCCCGTCCCTCCGCCTCG 106690 ||| || ||||| | |||| ||| | | || ||| | | |||| Sbjct 38508 AATGGCAAACCACAATTGCTGGGCTTTGACAGT--CTTTCGGGCAATGTTTTGAGACTCG 38451 Query 106691 TACTTTGTGTAGAGGGCTTCAAACTC-CTCACCCACCGCGTCGGAGAGACCTGGTGCCTT 106749 |||||| || | || ||||| || || |||| | || | || | ||| |||| Sbjct 38450 TACTTTTCATATAACGCATCAAATTCGCTTCCCCATGTC-TCATAAAGTCGTGGAGCCTC 38392 Query 106750 GTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGG 106809 || |||||||| | | ||||| || || || || ||||| || || || || Sbjct 38391 GTTCGGACAGAATAAACTCCATTCTTGGTTGTCTTCCACACGTTTCATAAACAGATCGGG 38332 Query 106810 AATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCG 106869 ||||| || | |||| | ||||| | ||| ||| | || || || || Sbjct 38331 GATCCAAAGAGCATAAAACAAATCTCGAGCTCGATGGAGTTCATTTCCATGATTCTTACG 38272 Query 106870 TAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC 106929 || || || ||||| | ||||||||||||||| ||||| ||||| | ||| | ||| || Sbjct 38271 TAGTTCCAGAAACTCAAAGATATCCGCGTGCCAGGGCTCTAGATAAATTGCAAAAGACCC 38212 Query 106930 CTTTCGACGCCCAGC---TTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCAT 106986 || || |||| | ||||| || || || |||||| | || || || |||||||| Sbjct 38211 TTTCCGCTTCCCACCGCCTTGATCAACGTATCGAGCTGTGTCATTGAACACCCGAAGCAT 38152 Query 106987 TGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCAC 107046 ||||| ||| |||| || ||||| ||||| |||||| | || ||| | | Sbjct 38151 TGGAACAATTCCATTCGAACTTCCATTCGTCCCGCGAATATAACTGTTGGTGGAGCGAAT 38092 Query 107047 ATCATGGATGTGC--ATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTA 107104 || |||| | | | |||||||| |||||||||||||| || |||||| | | Sbjct 38091 AT--TGGAAATACTGACGCCAATACCGCCAGCCCACTTTGAAATACACGCACATTGTTTC 38034 Query 107105 AGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGAC 107164 || || | || || |||| ||| || || || | ||| | || || || || Sbjct 38033 AGCGTGTCGTAAATGCCGTCGATAGAATCATCTTGCATGGATAATAGAAAACACGACGAT 37974 Query 107165 ATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTG---AATGAACATA 107221 | || |||| || || || |||||||| || || || ||||| || || |||| | Sbjct 37973 AATTGGGGTCGAGGCGTTCCCGCATTGAAAAGCGTCGGAGTTGCATGCGTAAAGAACTT- 37915 Query 107222 CCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCG 107281 ||| ||||| | || || || ||||| || | || | | || ||| |||||| Sbjct 37914 --TTGTGACATGTGTTCATACGTTTCCAAAACGGCGTCCAAATTCTCTTTGTGTATGCCG 37857 Query 107282 ATGGCCACACGCATAAACATGTATTG-GGGTGTT 107314 | ||||| ||||| | ||| | ||| ||| ||| Sbjct 37856 ACAGCCACTCGCATTATCATATGTTGTGGGCGTT 37823 >seq1503 Length=45688 Score = 140 bits (154), Expect = 4e-28 Identities = 303/449 (67%), Gaps = 6/449 (1%) Strand=Plus/Plus Query 117286 TGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCC 117345 || || || ||||| || || || |||||||| ||||| || || ||||| | || Sbjct 34308 TGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCAGGCATCAATCCT 34367 Query 117346 CGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACAC 117405 || ||||||| |||| | |||| ||||||||| |||||||| ||||| || || || | Sbjct 34368 CGTTTCTTCAGCCAAAATATAGAGCAGAATGATCCGGAGAAAAAGATTCCTTCGACGGCC 34427 Query 117406 GCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCAAACCATTTCATTGCC 117465 ||||| || | | | || || || ||| | |||||| || ||||||||| ||| Sbjct 34428 GCAAAGGCTACCACTCTTTCTGCAAACGAGGCATACTTTGGATCGCACCATTTCAACGCC 34487 Query 117466 CATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTTCTTT 117525 |||| || || || || || || | |||| || || | ||| |||| ||| Sbjct 34488 CATTGTGCTTTATTGGTAACGCACGGGATTGTTTCAATCGCGCACAGTAAATGCTGTTTT 34547 Query 117526 TCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAACCATT 117585 |||| | ||| || |||||| | ||||||||| ||||| ||| || | || Sbjct 34548 TCAGTTGGATCTTTGATGTATGTATCAATCAATAACGAATACACTTCCGAGTGTATATTT 34607 Query 117586 TCATTATGGCA--TTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGCACTTCATCCG 117643 || ||| ||| |||| || |||| || | || |||||| ||||| || ||| | | Sbjct 34608 TC--TATTGCAATTTGAAATCCGTAAAAGCATCGAGCTTCGGGGATCTGAACCTCA-CTG 34664 Query 117644 CA-AAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATGCCAGG 117702 | ||||| | || ||| ||| ||||||||||| | |||||||| |||| Sbjct 34665 CTGAAATTCATGGCGAGATTTTCATTGACAATTCCATCACTGGCTGCAAAGAAGGCCAAC 34724 Query 117703 ATGTACTTTATGAATTTCTTTTCATTTTC 117731 | || || || || | ||||||| || Sbjct 34725 ACGTGTTTGATAAAGTGTCTTTCATTGTC 34753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589938144388160