Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000961115.1_202015-03-24] 5,784 sequences; 32,721,549 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1503 104 4e-17 >seq1503 Length=45688 Score = 104 bits (114), Expect = 4e-17 Identities = 377/580 (65%), Gaps = 20/580 (3%) Strand=Plus/Minus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACT---GGACCGCCGAAGAGATT 25530 || || ||||| ||||| ||||| || | | ||| || ||||||| ||||| || Sbjct 34849 GAGATTTGGGACATGTATAAGAAAGC---AGAGGCAAGCTTTTGGACCGCAGAAGAAATC 34793 Query 25531 GATCTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTC 25590 ||| ||| | |||||| | | |||| | |||| | | || || ||| || Sbjct 34792 GATTTGGTGCATGACATGAATGACTGGCTTAATATATCGGACAATGAAAGACACTTTATC 34733 Query 25591 AAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAG 25650 || |||||||||| |||||||||||| |||||| || || || || ||||| | | Sbjct 34732 AAACACGTGTTGGCCTTCTTTGCAGCCAGTGATGGAATTGTCAATGAAAATCTCGCCATG 34673 Query 25651 AGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCC 25710 | |||| ||| || || ||| | || || || || ||||| || || || || Sbjct 34672 AATTTCAGCAGTGAGGTTCAGATCCCCGAAGCTCGATGCTTTTACGGATTTCAAATTGCA 34613 Query 25711 ATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT---GACGTACATTACAGAC 25767 || |||||| | ||||| || |||||| | | | |||| || ||||| | ||| Sbjct 34612 ATAGAAAATATACACTCGGAAGTGTATTC---GTTATTGATTGATACATACATCAAAGAT 34556 Query 25768 GTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAG 25827 | || | | | | | | | || || || || || || | | | || Sbjct 34555 CCAACTGAAAAACAGCATTTACTGTGCGCGATTGAAACAATCCCGTGCGTTACCAATAAA 34496 Query 25828 GCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAG--CGCTACGTTTGGCGAGCGGCTGG 25885 || | ||||| |||| ||| | | ||| || || |||||| || | ||| Sbjct 34495 GCACAATGGGCGTTGAAATGGTGC--GATCCAAAGTATGCCTCGTTTGCAGAAAGAGTGG 34438 Query 25886 TAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT-TGCGGCCATCTTCTGG 25944 |||||||||| || || || || ||||||||| ||| || || ||| | || || ||| Sbjct 34437 TAGCCTTTGCGGCCGTCGAAGGAATCTTTTTCTCCGGATCATTCTGC-TCTATATTTTGG 34379 Query 25945 CTCAAGCAGAAGGGGA-CCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGA 26003 || ||| | | | ||| ||||| || || | |||||| || ||||||||||| | || Sbjct 34378 CTGAAG-AAACGAGGATTGATGCCTGGACTTTGCTTTTCAAATGAGCTCATCAGTCGTGA 34320 Query 26004 CGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACG 26043 || || || || | || ||||| || ||| | ||| || Sbjct 34319 TGAAGGACTACATTGTGACTTTGCATGTCTGATGTACTCG 34280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928777644520960