Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000961115.1_202015-03-24] 5,784 sequences; 32,721,549 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq174 159 5e-34 >seq174 Length=119447 Score = 159 bits (176), Expect = 5e-34 Identities = 296/432 (69%), Gaps = 2/432 (0%) Strand=Plus/Minus Query 47757 CTCAACAAACTGACGGACAGAATATTGATTTCCTGTGGCAATAACAAAATCATCAGGTTC 47816 ||| ||||||| |||||| |||| | |||||| || | |||||||| | ||| || Sbjct 47320 CTCCACAAACTCACGGACCGAATGCGCTTCTCCTGTAGCCACGACAAAATCTTGAGGATC 47261 Query 47817 TTCTTGTTGAAGCATTAACCACATAGCCTCGACATAATCTCTGGCATGTCCCCAGTCACG 47876 | || || | |||| ||||||| |||||||| ||||| ||||| |||||||| || Sbjct 47260 ATTATGCTGCATCATTCTCCACATACATTCGACATAGTCTCTTGCATGACCCCAGTCTCG 47201 Query 47877 AAGTGCATCAAGATTTCCTAGATATAAACAGTCTTGCTTACCTTCAGAGATTGCTTTTAA 47936 ||||| | |||||| ||||| | || ||||| | |||||| ||| || | || Sbjct 47200 TTTAGCATCCAAATTTCCAAGATAGAGGCAATCTTGATACCCTTCATTGAT-GCGTACAA 47142 Query 47937 T-GCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGAGATTCATGATTAA 47995 || | |||||||| ||||| || || ||| || || | |||| || ||||||| Sbjct 47141 CCGCGCGGGTAATCTTGCGAGTCACGAACGTTAGCCCCCGGCGTGGACTCTCGTGATTAA 47082 Query 47996 AAAGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGTTCTTTACTATCCAGT 48055 | | || ||| | ||| | ||| |||| ||| | || || || ||| | Sbjct 47081 ATAAGATTCCATTCACTGCAAATATTTTATATGCTTCTCTGTAATTAACGACCGACCAAT 47022 Query 48056 ACCCATAGAGTTTTGCAACACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCT 48115 | || | | ||||||||||| || ||||| || || || ||| || || ||| Sbjct 47021 ATGCAAATTGCTTTGCAACACCGTACGGAGATCGCGGGTAAAAAACCGTCTGTTCATTCT 46962 Query 48116 GTGGAGTCTCTTGCACCTTACCATAAAGTTCACTGGTGGATGCTTGATAGATACGAACCC 48175 |||| || ||| | | || || || || ||||| ||||| |||||||| | || ||| Sbjct 46961 GTGGCGTTTCTCGAGCGTTCCCGTAGAGCTCACTCGTGGAAGCTTGATAAAACCGCACCG 46902 Query 48176 TATCTTCCATCT 48187 | |||||||||| Sbjct 46901 TGTCTTCCATCT 46890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665446284754880