Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000961115.1_202015-03-24] 5,784 sequences; 32,721,549 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq1476 82.4 5e-11 >seq1476 Length=9414 Score = 82.4 bits (90), Expect = 5e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || ||||| |||| || ||| ||||||||||| || |||| || |||| | || Sbjct 8858 AGTACCAGATGAAGCGTAGACTCTTTCTGAATGTTGTAATCCGCAAGCGTGCGTCCGTCT 8917 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||||||| || ||||| || || || |||||||||||| | || | ||| || ||||| Sbjct 8918 TCCAGTTGTTTACCGGCAAAAATTAGACGTTGCTGGTCTGGAGGAATCCCTTCTTTGTCC 8977 Query 34886 TTTATTTT 34893 | ||||| Sbjct 8978 TGGATTTT 8985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325669841100296