Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000961115.1_202015-03-24] 5,784 sequences; 32,721,549 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq2942 93.3 4e-14 seq5374 82.4 7e-11 >seq2942 Length=30195 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/192 (71%), Gaps = 4/192 (2%) Strand=Plus/Minus Query 133471 CTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGCCCGCGTA 133528 |||| || || |||||||| | | ||| || || ||||| | || || || ||| | Sbjct 17588 CTTTTTGGATGTTGTAATCCGCGAGCGTTCGGCCG--TCCTCCAATTGTTTTCCTGCGAA 17531 Query 133529 AATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTG 133588 ||| | ||||| ||||||||||| || ||||||||||| ||||| ||| | | Sbjct 17530 AATCAAACGCTGTTGGTCGGGAGGAATTCCTTCCTTGTCTTGAATCTTCGCCTTCACATT 17471 Query 133589 CTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTAC 133648 || | |||||||| | || || || | |||| ||||| ||||| || || || || Sbjct 17470 ATCGATCGTGTCGGATGATTCGACCTCAAGAGTGATTGTTTTCCCGGTGAGTGTCTTGAC 17411 Query 133649 GAAAATCTGCAT 133660 |||||||||||| Sbjct 17410 GAAAATCTGCAT 17399 >seq5374 Length=4546 Score = 82.4 bits (90), Expect = 7e-11 Identities = 140/201 (70%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 || || |||||||| || |||||||| | | || ||| ||| || || || || | Sbjct 4405 GTTGATTCTTTCTGGATGTTGTAATCCGCAAGAGT--ACGTCCGTCTTCTAGTTGTTTTC 4348 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || || || ||||| || ||||| || ||||| ||||| ||||| || Sbjct 4347 CAGCGAAGATCAGACGTTGCTGATCAGGAGGAATTCCTTCTTTGTCTTGAATCTTGGCCT 4288 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | |||||| | | ||| || || | |||| ||| || || || || | Sbjct 4287 TTACATTATCGATCGTGTCTGAAGACTCAACTTCCAAAGTGATGGTCTTTCCAGTAAGCG 4228 Query 133642 TTTTTACGAAAATCTGCATGG 133662 |||| || ||||||||||||| Sbjct 4227 TTTTCACAAAAATCTGCATGG 4207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483385848676160