Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000961115.1_202015-03-24] 5,784 sequences; 32,721,549 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq3351 116 3e-21 >seq3351 Length=46634 Score = 116 bits (128), Expect = 3e-21 Identities = 188/268 (70%), Gaps = 2/268 (1%) Strand=Plus/Minus Query 136639 ACGGTGAATTGGATTGTATTCGCGGCAGGTTTAGTTCTCAGATAGTACATGCCCGTCTTT 136698 || ||||||||||||| || || || |||| ||||||||||| || ||||| Sbjct 39584 ACTGTGAATTGGATTGCATCTGCTCTTGGACGTGTTCGGAGATAGTACATTCCTGTCTTG 39525 Query 136699 AAACCCTTCTCCCAGGAATAATTATGTATAGATGACAAAATTTT-ATAGCTCGGATCGGC 136757 | ||| || | ||| | || ||| || || | | | | | || |||| ||||| Sbjct 39524 AGACCTTTTTTCCATGCGTAGAAATGCATCGAAGTGAGTTTACTGACAG-TCGGGTCGGC 39466 Query 136758 CACGAAAAGATTTAGCGATTGGCTCTGATCGATGTAAGGTCCGCGGTCTGCGGCCATGTT 136817 | | || |||||| ||||| |||||| ||||| | ||| || || || ||||||| Sbjct 39465 AATGTGAATATTTAGTGATTGACTCTGACAAATGTACGCTCCTCGATCGGCAGCCATGTC 39406 Query 136818 CAATAGTACTTTTTGCTTAATTTCCCAAGCGGTTTTAAAGAGCTCCTTGACATTGGGCGG 136877 ||| | | |||||||| ||||||||| | ||||| | || || |||| ||||| Sbjct 39405 CAAAATCGCCTTTTGCTTGATTTCCCAAACTGTTTTGTACTTTTCTTTCACATGAGGCGG 39346 Query 136878 AATTTCATCGATATTCTGTACAGATCCG 136905 ||||||| ||||||| ||||| || ||| Sbjct 39345 AATTTCAGCGATATTTTGTACGGAACCG 39318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445062219674880