Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000961115.1_202015-03-24] 5,784 sequences; 32,721,549 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq1503 129 8e-24 >seq1503 Length=45688 Score = 129 bits (142), Expect = 8e-24 Identities = 391/592 (66%), Gaps = 14/592 (2%) Strand=Plus/Minus Query 1455725 CTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCG-CTACCAGCGGATATGGGA 1455783 || || || || ||||||||||||||| | || || || | | | | | | || ||||| Sbjct 34897 CTTCGAGAAAATCCGAACCGCTTTGTCTTATTTCCGATACAACAATCTGAG-ATTTGGGA 34839 Query 1455784 AATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCC- 1455842 ||||| | |||| | ||||| |||||||||||| || || |||| | || || Sbjct 34838 CATGTATAAGAAAG-CAGAGGCAAGCTTTTGGACCGCAGAAGAAATCGATTT-GGTGCAT 34781 Query 1455843 GACACGGTCCACTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTC 1455902 |||| | ||||| | | ||| | || | || || ||||| ||||| | Sbjct 34780 GACATGAATGACTGGCTTAATATATCGGACAATGAAAGACACTTTATCAAACACGTGTTG 34721 Query 1455903 GCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAA 1455962 ||||| ||| || ||||| ||||| || || || || || ||| || | | Sbjct 34720 GCCTTCTTT-GCAGCCAGTGATGGAATTGTCAATGAAAATCTCGCCATGAATTTCAGCAG 34662 Query 1455963 AGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACAT 1456022 ||||| || | || || || || | |||||||| || || || || || ||||| || Sbjct 34661 TGAGGTTCAGATCCCCGAAGCTCGATGCTTTTACGGATTTCAAATTGCAATAGAAAATAT 34602 Query 1456023 CCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGA 1456082 ||||| ||| || ||| | |||| || || ||| |||| || || || || | Sbjct 34601 ACACTCGGAAGTGTATTCGTTATTGATTGATACATACATCAAAGATCCAACTGAAAAACA 34542 Query 1456083 CCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGAT 1456142 || | | |||| || || || | |||| || | || || || | |||||| | Sbjct 34541 GCATTTACTGTGCGCGATTGAAACAATCCCGTGCGTTACCAATAAAGCACAATGGGCGTT 34482 Query 1456143 GAAGTGGATCAA--CAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCG 1456200 ||| ||| | | ||| | |||||| ||||| || | | || | |||||| | Sbjct 34481 GAAATGGTGCGATCCAAAGTATGCCTCG----TTTGCAGAAAGAGTGGTAGCCTTTGCGG 34426 Query 1456201 C-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCG 1456259 | ||||| || ||||||||||| || |||||| | || |||||||| ||||| || | Sbjct 34425 CCGTCGAAGGAATCTTTTTCTCCGGATCATTCTGCTCTATATTTTGGCTGAAGAAACGAG 34366 Query 1456260 GCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGACGAAG 1456311 | | ||||| || ||| |||||| || || | |||||||| || |||| Sbjct 34365 GATTGATGCCTGGACTT-TGCTTTTCAAATGAGCTCATCAGTCGTGATGAAG 34315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177253322569008