Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000961115.1_202015-03-24] 5,784 sequences; 32,721,549 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq174 84.2 3e-11 >seq174 Length=119447 Score = 84.2 bits (92), Expect = 3e-11 Identities = 275/425 (65%), Gaps = 2/425 (0%) Strand=Plus/Plus Query 161299 AGATAGGGTCCGTATCTACCAGGCATCCACCAGTGAGTTGTATGGGTTGGTACAAGAGAC 161358 ||| | ||| || | || || || ||||| |||||| | || ||| | | ||| || Sbjct 46897 AGACACGGTGCGGTTTTATCAAGCTTCCACGAGTGAGCTCTACGGGAACGCTCGAGAAAC 46956 Query 161359 ACCACAGAAAGAAACAACACCTTTCTACCCACGATCTCCATATGGCGTAGCTAAACTCTA 161418 |||||||| ||| || ||| ||||| |||||||| || || || || || | | Sbjct 46957 GCCACAGAATGAACAGACGGTTTTTTACCCGCGATCTCCGTACGGTGTTGCAAAGCAATT 47016 Query 161419 TGGATATTGGATTGTAAAGAACTACAGAGAGAGTTATGGGATGCACGCCAGT-AGTGGTA 161477 || ||||||| || || |||||||| ||| || || ||| | ||| | Sbjct 47017 TGCATATTGGTCGGTCGTTAATTACAGAGAAGCATATAAAATATTTGC-AGTGAATGGAA 47075 Query 161478 TTCTATTCAACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCCGTAAGATTACTA 161537 | |||| || || ||| ||||| ||||| || ||||| || || |||||||| Sbjct 47076 TCTTATTTAATCACGAGAGTCCACGCCGGGGGCTAACGTTCGTGACTCGCAAGATTACCC 47135 Query 161538 GGGGACTATCCCGTATTAGTACAGGACTACAGGATTGTCTATACCTAGGTAATCTAAACT 161597 | | | || || | | ||| || ||||| || || || || ||| | | Sbjct 47136 GCGCGGTTGTACGCATCAATGAAGGGTATCAAGATTGCCTCTATCTTGGAAATTTGGATG 47195 Query 161598 CAAGACGAGATTGGGGTCATGCTGAAGACTATGTGGAGGCTATGTGGTTGATGTTACAAC 161657 | | |||||| ||||||||||| ||||||||| || ||||||| ||| | || | Sbjct 47196 CTAAACGAGACTGGGGTCATGCAAGAGACTATGTCGAATGTATGTGGAGAATGATGCAGC 47255 Query 161658 AGGAAACTCCTGATGACTATGTGATTGCCACAGGTAAAGAGTATTCAGTGAAGGACTTTG 161717 | | |||| | || | ||| | || ||||| ||| | |||| || || |||| Sbjct 47256 ATAATGATCCTCAAGATTTTGTCGTGGCTACAGGAGAAGCGCATTCGGTCCGTGAGTTTG 47315 Query 161718 TAGAG 161722 | ||| Sbjct 47316 TGGAG 47320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729876826089920