Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000961115.1_202015-03-24] 5,784 sequences; 32,721,549 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq650 93.3 3e-14 >seq650 Length=49279 Score = 93.3 bits (102), Expect = 3e-14 Identities = 182/269 (68%), Gaps = 0/269 (0%) Strand=Plus/Plus Query 111667 AGTTTTGGAAAGGGGGTAGGCTTTCGGGTAAGCTGTAATTGTAAAGGCTGTATGTGATTT 111726 ||| ||||||| ||| || | || ||| ||| |||| || | | |||||| Sbjct 30226 AGTGTTGGAAACGGGCGTGGAGTGCGTTCAAGTTGTGCCTGTAGCGGTTCCAAGTGATTC 30285 Query 111727 AAATAAACATGCGCATCTCCTATACAATGGATCAATTCCCAAGGCTCCAAACCAGTGATG 111786 | || | ||| |||||||| || ||| | || || | || | | | |||| | | Sbjct 30286 ATGTAGATATGGGCATCTCCGATCACATGAACAAACTCGCCGGGTTGGAGATCAGTCACG 30345 Query 111787 TGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACACCTAGGCCC 111846 ||||||||||| | ||| | || ||| |||||||| |||||||| || || || || Sbjct 30346 TGTGCAATCATTTTTGTCAAAAGCGCGTAGCTAGCAATATTAAATGGAACGCCCAGACCA 30405 Query 111847 ATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACATAAAATTGA 111906 ||||| | |||| || || | || ||||||| || | || || |||||||| Sbjct 30406 ATATCAGCGGATCGCTGGTACATTTGGCATGATAATTCCCCATTTGCAACGTAAAATTGG 30465 Query 111907 CAAAGTACATGACAAGGAGGCAATGCCAT 111935 || | | |||||| ||||| |||||||| Sbjct 30466 CACATCAGATGACAGGGAGGTAATGCCAT 30494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391917970774792