Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001078535.1_202014-05-15] 5,216 sequences; 34,452,595 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq23 143 3e-29 >seq23 Length=155023 Score = 143 bits (158), Expect = 3e-29 Identities = 320/473 (68%), Gaps = 8/473 (2%) Strand=Plus/Minus Query 116729 GACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATC 116788 ||||| || | || || ||||| |||||| ||||||| || || ||||| || || || Sbjct 36806 GACAATGAAAGACACTTTATCAAACACGTGTTGGCCTTCTTTGCAGCCAGTGATGGAATT 36747 Query 116789 GTCAACGAGAATCTGGTCGAGCGTTTCGCTCAG-GAGGTGCAGGTGGCCGAGGCGCGGTG 116847 ||||| || ||||| | | | |||| ||| ||||| ||| | |||| || || || Sbjct 36746 GTCAATGAAAATCTCGCCATGAATTTCAG-CAGTGAGGTTCAGATCCCCGAAGCTCGATG 36688 Query 116848 CTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGTATTCGACCCTCAT 116907 ||| ||||| ||||| || || || || || | ||||||||| |||||||| | || Sbjct 36687 CTTTTACGGATTTCAAATTGCAATAGAAAATATACACTCGGAAGTGTATTCGTTATTGAT 36628 Query 116908 CGACACGTACGTGCGCTCTTCGGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGAT 116967 || || ||| | | | || || | | ||| || ||| || || || || Sbjct 36627 TGATACATACATCAAAGATCCAACTGAAAAACAGCATTTACTGTGCGCGATTGAAACAAT 36568 Query 116968 GCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAG-AGGCCG 117026 |||||||| | | || || | |||||| || ||| || || || | ||| Sbjct 36567 CCCGTGCGTTACCAATAAAGCACAATGGGCGTTGAAATGGTGCGATC-CAAAGTATGCCT 36509 Query 117027 CCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTT 117086 | || | || | |||| ||||| ||||||||||| || |||| || || || | Sbjct 36508 CGTTTGCAGAAAGAGTGGTAGCCTTTGCGGCCGTCGAAGGAATCTTTTTCTCCGGATCAT 36449 Query 117087 TCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCC--TGACTTTCAGCAA 117144 || | | ||||||||||| |||||||| || | ||||| || | || ||||| || Sbjct 36448 TCTGCTCTATATTTTGGCTGAAGAAACGAGGATTGATGCCTGGACTTTGCTTTTCA--AA 36391 Query 117145 CGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGT 117197 ||||||||| | || || || || ||||| |||||||| ||| || ||| Sbjct 36390 TGAGCTCATCAGTCGTGATGAAGGACTACATTGTGACTTTGCATGTCTGATGT 36338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515185607708160