Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001078535.1_202014-05-15] 5,216 sequences; 34,452,595 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq226 95.1 1e-14 >seq226 Length=41712 Score = 95.1 bits (104), Expect = 1e-14 Identities = 137/191 (72%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 118549 CTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGA 118608 ||||||| ||||||||||| | || || ||||| | |||||||| ||| | | Sbjct 24115 CTTTTTGGATGTTGTAATCCGCGAGCGTTCGGCCGTCCTCCAATTGTTTTCCTGCGAAAA 24174 Query 118609 TGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTT 118668 | | |||||| || |||||||| || || ||||||||| ||| || || || | | Sbjct 24175 TCAAACGCTGTTGGTCGGGAGGAATTCCTTCCTTGTCTTGAATCTTCGCCTTCACATTAT 24234 Query 118669 CGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 118727 ||| ||||| | || | |||||||| | || | ||||| ||||| || || || || Sbjct 24235 CGATCGTGTCGGATGAT-TCGACCTCAAGAGTGATTGTTTTCCCGGTGAGTGTCTTGACG 24293 Query 118728 AAAATCTGCAT 118738 ||||||||||| Sbjct 24294 AAAATCTGCAT 24304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433802821401472