Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001078535.1_202014-05-15] 5,216 sequences; 34,452,595 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq23 257 2e-63 >seq23 Length=155023 Score = 257 bits (284), Expect = 2e-63 Identities = 523/762 (69%), Gaps = 31/762 (4%) Strand=Plus/Plus Query 13918 ATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCAT 13977 |||||| | ||| | ||| ||||| ||||| ||||| |||| ||| || || | ||||| Sbjct 36060 ATATTCTCCAACGCGTTTCTCAAAAAAGTTTGTTTTTCCTTGCAGAGAAATCATATCCAT 36119 Query 13978 AAAATCAAATGGATTTGT----TGACATAAACACTTTATCACAACCTAGTTCTAATAGTA 14033 | ||||| ||||| | ||| |||| ||| | || || ||| | || | Sbjct 36120 CCAGTCAAAGGGATTAGAAGCGTGATATAA---CTTGCTGACG-CCAAGTGCATGTAACA 36175 Query 14034 ATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTT 14093 ||| |||||| | ||||| || |||||| ||| ||| ||||||| || ||||| | Sbjct 36176 ATCGATCCGCCACAAACTCGATGTATTGACCCATCAAACTTGAATTCATTCCAATTAGCT 36235 Query 14094 TTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAA 14153 || |||| | || || |||||||| ||| || || || ||| ||| | Sbjct 36236 CGACTGGAAGTGAATCTCGTACAAATTCTTGTTCGATGATAACGGCGTCGGA---AATGA 36292 Query 14154 TCGTAATAATTT--CATTAGAAGGAGGATATTTTAGATGTTTAAAA---ATTAAACACGC 14208 | | | ||| | || ||| | | |||| |||| | || | ||| || Sbjct 36293 TTGCATGAATAGAGCCTTCT--GGAAGCTTATTTACCAGTTTCGAGTACATCAGACATGC 36350 Query 14209 AAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGG 14268 ||| |||||||| || || ||||| | ||| || || || |||||||| | ||| || Sbjct 36351 AAAGTCACAATGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCAGG 36410 Query 14269 CATCAATCCTCGtttttttAACCAAAATATTGCAGC-GAATGATCCGGAAAAGAATATTC 14327 ||||||||||||||| || | ||||||||| | ||| |||||||||||| || || |||| Sbjct 36411 CATCAATCCTCGTTTCTTCAGCCAAAATATAG-AGCAGAATGATCCGGAGAAAAAGATTC 36469 Query 14328 CCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTT--TTTTGTTCGATAT 14385 | || || || ||||| |||| | || |||| ||||||| || | ||| | ||| Sbjct 36470 CTTCGACGGCCGCAAAGGCTACCACTCTTTCTGCAAACGAGGCATACTTTGGATCG--CA 36527 Query 14386 CCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAA 14445 |||||| ||||||| | ||| || ||| | ||||||||||| || | Sbjct 36528 CCATTTCAACGCCCATTGTGCTTTATTGGTAACGCACGGGATTGTTTCAATCGCGCACAG 36587 Query 14446 TAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTC 14505 |||||| | || || | | | | |||||||||||||| | ||| ||||| ||| Sbjct 36588 TAAATGCTGTTTTTCAGTTGGATCTTTGATGTATGTATCAATCAATAACGAATACACTTC 36647 Query 14506 AGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTG 14565 |||||||| ||||| || || || ||||| || ||||| |||| |||||| | || Sbjct 36648 CGAGTGTATATTTTCTATTGCAATTTGAAATCCGTAAAAGCATCGAGCTTCGGGGATCTG 36707 Query 14566 TACCT--CTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCA 14623 |||| ||| ||| || | ||| | ||||||||| || || |||||||| |||||| Sbjct 36708 AACCTCACTGCTGAAATTCAT--GGCGAGATTTTCATTGACAATTCCATCACTGGCTGCA 36765 Query 14624 AAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTG 14665 || || ||||| | || ||| ||||||| | || ||||||| Sbjct 36766 AAGAAGGCCAACACGTGTTTGATAAAGTGT--CT-TTCATTG 36804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482314151066880