Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001078535.1_202014-05-15] 5,216 sequences; 34,452,595 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq271 105 1e-17 >seq271 Length=35139 Score = 105 bits (116), Expect = 1e-17 Identities = 135/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 98040 TACAAGACTGTCTGGGAGATTCCGACCAAGACGCTGATCGATATGGCTGCCGACAGAGGT 98099 ||||| || || ||||| || | ||| || | | || ||||||||||| |||| Sbjct 29523 TACAAAACAGTTTGGGAAATCAAGCAAAAGGCGATTTTGGACATGGCTGCCGATCGAGGA 29464 Query 98100 GTCTACATTGACCAGAGTCAATCGTTCAATCTGTACGTTGCCGAGCCCACCTACAGTCGT 98159 | |||||| ||||||||||| | ||| | || ||||||| || || |||| Sbjct 29463 GCGTACATTTGTCAGAGTCAATCACTAAATATTCACATTGCCGACCCGACTGTCAGTAAA 29404 Query 98160 ATGACTTCGATACACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATGTACTATCTG 98219 | |||||||| || || ||||||||||| || || |||||||| || ||||||||||| Sbjct 29403 CTCACTTCGATGCATTTCTACGCATGGAAAAAAGGTCTCAAGACAGGAATGTACTATCTC 29344 Query 98220 AGAACA 98225 ||||| Sbjct 29343 CGAACA 29338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741010882940160