Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001078535.1_202014-05-15] 5,216 sequences; 34,452,595 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq74 158 2e-34 seq7 132 8e-27 >seq74 Length=89144 Score = 158 bits (174), Expect = 2e-34 Identities = 201/276 (73%), Gaps = 3/276 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||||||||| | | |||||| || |||||||||||||||||||| ||||| || Sbjct 24076 GCAAAGCGTCATCGTAAAGTTCTTCGTGACAACATCCAAGGAATCACCAAACCAGCCATT 24135 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||||| ||||||||||| || ||||| ||| || || | |||| ||||| | Sbjct 24136 CGTCGTCTTGCTCGTCGTGGAGGTGTCAAACGTATCAGCGGTCTTATCTACGAAGAAACA 24195 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | |||| | || | ||| | | | ||||| | ||| | | || || ||| Sbjct 24196 CGAGGTGTTCTCAAAGTGTTCTTGGAAAATGTTATTCGCGATTCCGTAACTTACACAGAG 24255 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 |||||| | |||||||| || | |||||| | ||||| ||| | ||||||||||| Sbjct 24256 CACGCTCGTAGAAAGACTGTAACAGCAATGGATGTGGTCTACGCACTTAAACGTCAAGGA 24315 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTA---ATCTTCT 16705 |||| |||||||||| || |||| ||||||| Sbjct 24316 CGTACACTTTATGGTTTCGGTGGTTAGATATCTTCT 24351 >seq7 Length=223839 Score = 132 bits (146), Expect = 8e-27 Identities = 186/261 (71%), Gaps = 0/261 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| || |||||||| | | || || |||||||||||||| ||||| ||||| ||||| Sbjct 166816 CGCCAAACGTCATCGTAAAGTACTGCGCGATAACATCCAAGGTATCACAAAGCCCGCTAT 166875 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||||||| ||||||||||| || || ||||| || || || |||| ||||| | Sbjct 166876 CCGTCGTCTTGCTCGTCGTGGAGGTGTAAAGCGAATCAGCGGTCTGATCTACGAAGAAAC 166935 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| ||| | || | ||||| | | || |||| ||| | | || ||||| Sbjct 166936 ACGTGGAGTTCTCAAAGTATTCCTTGAAAATGTCATCCGTGACTCAGTAACATACACCGA 166995 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||| || | || || || || | |||||| |||| ||||| ||||||||||||| Sbjct 166996 GCATGCGCGCAGAAAAACAGTGACAGCAATGGATGTCGTATATGCTCTGAAACGTCAAGG 167055 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 | | | | || |||||||| Sbjct 167056 CAGAACCCTCTACGGTTTTGG 167076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79070430974688