Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001078535.1_202014-05-15] 5,216 sequences; 34,452,595 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq23 242 4e-59 >seq23 Length=155023 Score = 242 bits (268), Expect = 4e-59 Identities = 646/966 (67%), Gaps = 31/966 (3%) Strand=Plus/Plus Query 92741 ATTAGAAATCTGCATCTAGTGTAAATACATTGTCAAGTGGATTCTTATTCAT-AACACCA 92799 |||||||||||||||||| || || || | || || | | || ||||||| Sbjct 35996 ATTAGAAATCTGCATCTAAAGTGAAAACTTGCTCCTTTGCAG----AGACACCAACACCA 36051 Query 92800 CATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCCAAAGATATC 92859 |||| ||||| ||||| ||| ||||| || ||||| ||||||| || ||| ||| Sbjct 36052 GATTTCGCATATTCTCCAACGCGTTTCTCAAAAAAGTTTGTTTTTCCTTGCAGAGAAATC 36111 Query 92860 GAATTCA-CTAGTGATTGG-ATTCTTGGCGTTATAATACTTTTCACCGATCAACT-CGTA 92916 || || | ||| | || ||| |||| ||| |||| || ||| | | | Sbjct 36112 ATATCCATCCAGTCAAAGGGATTAGAAGCGTGATATAACTTGCTGACGC-CAAGTGCATG 36170 Query 92917 CAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAG 92976 || |||| ||| || ||||| || ||||| ||| ||||||| |||||||||| | Sbjct 36171 TAACAATCGATCCGCCACAAACTCGATGTATTGACCCATCAAACTTGAATTCATTCCAAT 36230 Query 92977 AAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAA 93036 || || || || | || | || |||| ||||| | |||||| || | Sbjct 36231 TAGCTCGACTGGAAGTGAATCTCGTACAAATTCTTGTTCGATGATAACGGCGTCGGAAAT 36290 Query 93037 GATTTCTATTACTCTACTATT-TGGTGGTTTTTGTACGACATAATTGTACATTAAGCACG 93095 |||| | || | | | || ||| | || | ||| | | |||||| | || | Sbjct 36291 GATTGC-ATGAATAGAGCCTTCTGGAAGCTTATTTACCAGTTTCGAGTACATCAGACATG 36349 Query 93096 CAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA--CC 93153 ||||||| ||||| ||||| || || || | |||||| |||| ||| || Sbjct 36350 CAAAGTCACAATGTAGTCCTTCATCACGACTGATGAGCTCATT--TGAAAAGCAAAGTCC 36407 Query 93154 TGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTA-CCAGaaaaaaaTA 93212 || | || |||||||||||| ||||||||||| || ||| || | || || ||||| | Sbjct 36408 AGGCATCAATCCTCGTTTCTTCAGCCAAAATATAGA-GCAGAATGATCCGGAGAAAAAGA 36466 Query 93213 TACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGA 93272 | ||||| ||||| ||||| || || | | ||| ||||| | || || ||| || Sbjct 36467 TTCCTTCGACGGCCGCAAAGGCTACCACTCTTTCTGCAAAC---GAGGCAT-ACTTTGGA 36522 Query 93273 TC----CATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCG 93328 || ||||| || ||||| | ||||| || ||| || || | |||||| || ||| Sbjct 36523 TCGCACCATTTCAACGCCCATTGTGCTTTATTGGTAACGCACGGGATTGTTTCAATCGCG 36582 Query 93329 TTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATAC 93388 | || | | | || | |||| ||||||||||| || || | |||||| Sbjct 36583 CACAGTAAATGCTGTTTTTCAGTTGGATCTTTGATGTATGTATCAATCAATAACGAATAC 36642 Query 93389 ATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTG 93448 | ||| || || | ||| || ||||||||||| |||||||| || |||| |||||| | | Sbjct 36643 ACTTCCGAGTGTATATTTTCTATTGCAATTTGAAATCCGTAAAAGCATCGAGCTTCGGGG 36702 Query 93449 ATCTGCACTTC-TTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGC 93507 ||||| || || || |||| || |||||||||||||||| || ||||| || Sbjct 36703 ATCTGAACCTCACTGCTGAAAT-TCATGGCGAGATTTTCATTGACAATTCCATCACTGGC 36761 Query 93508 TGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATCCCA 93567 |||||| || ||||| | || || ||||| ||| | |||| || | ||| ||| Sbjct 36762 TGCAAAGAAGGCCAACACGTGTTTGATAAAGTGTCTTTCATTGTCCGATATATTAAGCCA 36821 Query 93568 ATCGGATAGATCTTTTGAA--AGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCT 93625 || || || | || | | ||||| |||||| | |||||||| ||| |||||| Sbjct 36822 GTC--ATTCATGTCATGCACCAAATCGATTTCTTCTGCGGTCCAAAAGCTTGCCTCTGCT 36879 Query 93626 TTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGG 93685 || || ||||| ||||| || || | ||| || ||||||| |||||| || || || Sbjct 36880 TTCTTATACATGTCCCAAATCTCAGATTGTTGTATCGGAAATAAGACAAAGCGGTTCGGA 36939 Query 93686 TTATCT 93691 || ||| Sbjct 36940 TTTTCT 36945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556824492675840