Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001078535.1_202014-05-15] 5,216 sequences; 34,452,595 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq23 120 6e-22 >seq23 Length=155023 Score = 120 bits (132), Expect = 6e-22 Identities = 307/465 (66%), Gaps = 18/465 (4%) Strand=Plus/Minus Query 42412 TCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCA 42471 ||||| || | |||||||||| || ||| ||| || || |||||||| || || |||| Sbjct 36787 TCAAACACGTGTTGGCCTTCTTTGCAGCCAGTGATGGAATTGTCAATGAAAATCTCGCCA 36728 Query 42472 CCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAG 42531 | |||| | ||||| ||| | || || || ||||| ||||| || || || | Sbjct 36727 TGAATTTCAGCAGTGAGGTTCAGATCCCCGAAGCTCGATGCTTTTACGGATTTCAAATTG 36668 Query 42532 CCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATC 42591 | ||||| || | ||||| || ||||| | | || | | || |||||| |||| Sbjct 36667 CAATAGAAAATATACACTCGGAAGTGTATTCGTTATTGATTGATACATACATCAAAGATC 36608 Query 42592 CCGTCGAGCGTAACGGG-----CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAA 42646 | || ||| | |||| | || || || || || || ||| | | || Sbjct 36607 CAACTGAAA--AACAGCATTTACTGTGC---GCGATTGAAACAATCCCGTGCGTTACCAA 36553 Query 42647 GAAGGCGGACTGGGCGCTCAACTGG----ATCGAGAGTCCCGACGCAACGTTCGGCGAGA 42702 || || | |||||| | || ||| ||| | ||| | || |||| | || | Sbjct 36552 TAAAGCACAATGGGCGTTGAAATGGTGCGATCCAAAGT----ATGCCTCGTTTGCAGAAA 36497 Query 42703 GGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCT 42762 | ||||||||||| | |||||||| || ||||| ||||| || | ||| ||| || | Sbjct 36496 GAGTGGTAGCCTTTGCGGCCGTCGAAGGAATCTTTTTCTCCGGATCATTCTGCTCTATAT 36437 Query 42763 TCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCA 42822 | ||||| ||| | | | |||||| ||||| ||| || || || |||||||| Sbjct 36436 TTTGGCTGAAGAAACGAGGATTGATGCCTGGACTTTGCTTTTCAAATGAGCTCATCAGTC 36377 Query 42823 GGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGA 42867 | || || || || ||| | |||||||| || || ||| ||||| Sbjct 36376 GTGATGAAGGACTACATTGTGACTTTGCATGTCTGATGTACTCGA 36332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944277629084160