Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001078535.1_202014-05-15] 5,216 sequences; 34,452,595 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq271 125 9e-24 seq23 120 4e-22 >seq271 Length=35139 Score = 125 bits (138), Expect = 9e-24 Identities = 323/484 (67%), Gaps = 11/484 (2%) Strand=Plus/Plus Query 114788 TCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAG 114847 || || ||||| ||||| || || || |||||||| ||||| | || | ||| ||| Sbjct 30530 TCTTCCACACGTTTCATAAACAGATCGGGGATCCAAAGAGCATAAAACAAATCTCGAGCT 30589 Query 114848 CGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGC 114907 ||| ||||| || ||||| ||| | |||| ||| || | ||||||||||||| Sbjct 30590 CGATGGAGTTCATTTCCATGATTCTTACGTAGTTCCAGAAACTCAAAGATATCCGCGTGC 30649 Query 114908 CACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTACATAC 114964 || || || || || | || | ||||| || || | ||| | || | || || Sbjct 30650 CAGGGCTCTAGATAAATTGCAAAAGACCCTTTCCGCTTCCCACCGCCTTGATCAACGTAT 30709 Query 114965 CTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTC 115024 | |||||| |||| || || ||||||||||||| || |||| || ||||| ||| Sbjct 30710 CGAGCTGTGTCATTGAACACCCGAAGCATTGGAACAATTCCATTCGAACTTCCATTCGTC 30769 Query 115025 CCCCGAATACGAGACTTATTGGCTCTGACATCATGGATGTGC--ATACCAATACCCCCTG 115082 || |||||| | || ||| | || || |||| | | | |||||||| || | Sbjct 30770 CCGCGAATATAACTGTTGGTGGAGC-GA-ATATTGGAAATACTGACGCCAATACCGCCAG 30827 Query 115083 CCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCAC 115142 |||||||||| || ||| || | | || || |||| || |||||||| || ||| Sbjct 30828 CCCACTTTGAAATACACGCACATTGTTTCAGCGTGTCGTAAATGCCGTCGATAGAATCA- 30886 Query 115143 CCTTATTTGCGATA--AGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAA 115200 ||| || |||| || || || ||| | ||| || | || || || || ||||| Sbjct 30887 TCTTGCATG-GATAATAGAAAACACGACGATAATTGGGGTCGAGGCGTTCCCGCATTGAA 30945 Query 115201 GAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTATCGTAGGTCTCCAAGAC 115260 || || || || || || | || | ||| ||||| | || || || ||||| || Sbjct 30946 AAGCGTCGGAGTTGCATGCGTAAAGAACTTTTGTGACATGTGTTCATACGTTTCCAAAAC 31005 Query 115261 GGCG 115264 |||| Sbjct 31006 GGCG 31009 >seq23 Length=155023 Score = 120 bits (132), Expect = 4e-22 Identities = 268/398 (67%), Gaps = 6/398 (2%) Strand=Plus/Plus Query 126059 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCC 126118 || || || || ||||| |||||| ||||| || ||||| ||||| ||||| | || Sbjct 36361 TGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCAGGCATCAATCCT 36420 Query 126119 CGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACAC 126178 || ||||||| ||| || || | || ||||| || ||||| |||||||| || || | Sbjct 36421 CGTTTCTTCAGCCAAAATATAGAGCAGAATGATCCGGAGAAAAAGATTCCTTCGACGGCC 36480 Query 126179 GCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAACCACTTCATCGCC 126238 || || || | | | || ||||| ||| |||||| || |||| |||| |||| Sbjct 36481 GCAAAGGCTACCACTCTTTCTGCAAACGAGGCATACTTTGGATCGCACCATTTCAACGCC 36540 Query 126239 CACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAG-AGTTCCTTCTT 126297 || || || || || | ||||||| || | ||||| || || | | || || Sbjct 36541 CATTGTGCTTTATTGGTAACGCACGGGATTGTTTCAATCGCG-CACAGTAAATGCTGTTT 36599 Query 126298 TTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCAT 126357 ||| | ||||||||||||||| |||| || | | ||||| ||| ||| | | Sbjct 36600 TTCAGTTGGATCTTTGATGTATGTATCAATCAATAACGAATACACTTCCGAGTGTATATT 36659 Query 126358 TTCATTATGGCA--CTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCG 126415 ||| ||| ||| ||| | |||| || | || |||||| ||||| |||||| | Sbjct 36660 TTC--TATTGCAATTTGAAATCCGTAAAAGCATCGAGCTTCGGGGATCTGAACCTCACTG 36717 Query 126416 GCAAAATTGTTATTGATATTCTCAAAAACAATTCCATC 126453 ||||| | || ||| ||| ||||||||||| Sbjct 36718 CTGAAATTCATGGCGAGATTTTCATTGACAATTCCATC 36755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597314652545280