Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001078535.1_202014-05-15] 5,216 sequences; 34,452,595 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq271 127 2e-24 >seq271 Length=35139 Score = 127 bits (140), Expect = 2e-24 Identities = 418/644 (65%), Gaps = 8/644 (1%) Strand=Plus/Minus Query 93716 ATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCA 93775 ||||||| || |||| ||| |||||||||||||| ||||| || | || |||| | Sbjct 31136 ATTACGACTATTTTGGCTTTAAAACTCTGGAGAAATCGTATCTGTTGCGTGTGAATGGAA 31077 Query 93776 GGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACG 93835 || | || || || || || || | ||||| || || |||| || ||| | Sbjct 31076 AAGTGTGTGAACGCCCACAACATATGATAATGCGAGTGGCTGTCGGCATACACAAAGAGA 31017 Query 93836 ACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGCC 93894 | || |||||| | | | ||||| | ||| | ||| |||| | Sbjct 31016 ATTTGGACGCCGTTTTGGAAACGTATGAACACATGTCACAAAAGTTCTTTACGCATG-CA 30958 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATG 93954 || ||||| || ||||| ||||| || || || || | || |||||||| || | Sbjct 30957 ACTCCGACGCTTTTCAATGCGGGAACGCCTCGACCCCAATTATCGTCGTGTTTTCTATTA 30898 Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014 | | | | || || ||| ||| |||| ||||| || || | |||||| || Sbjct 30897 TCCATGCAAGATGATTCTATCGACGGCATTTACGACACGCTGAAACAATGTGCGTGTATT 30838 Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTAC 94074 ||||| | || || || || || ||||| | | | | || ||| || Sbjct 30837 TCAAAGTGGGCTGGCGGTATTGGCGTCAGTATTTCCAATATTCGCTCCACCAACAGTTAT 30778 Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134 || ||||| || ||||| | || || || | || || ||||| ||||| ||||| || Sbjct 30777 ATTCGCGGGACGAATGGAAGTTCGAATGGAATTGTTCCAATGCTTCGGGTGTTCAATGAC 30718 Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194 | || || ||||| || || || ||||||| | |||| || ||||| || | ||||| Sbjct 30717 ACAGCTCGATACGTTGATCAAGGCGGTGGGAAGCGGAAAGGGTCTTTTGCAATTTATCTA 30658 Query 94195 GAGCCCTGGCACGCGGA---CGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251 ||||||||||||||||| | | || |||| | || || || ||||| || || || Sbjct 30657 GAGCCCTGGCACGCGGATATCTTTGAG--TTTC-TGGAACTACGTAAGAATCATGGAAAT 30601 Query 94252 GATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311 || || | | || |||| | || || ||||| ||| | || || || ||||||||| Sbjct 30600 GAACTCCATCGAGCTCGAGATTTGTTTTATGCTCTTTGGATCCCCGATCTGTTTATGAAA 30541 Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGA 94355 || || || | ||| | |||||| | || ||||| || || Sbjct 30540 CGTGTGGAAGACAACCAAGAATGGAGTTTATTCTGTCCGAACGA 30497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494690944047360