Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001078535.1_202014-05-15] 5,216 sequences; 34,452,595 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq45 208 3e-48 seq425 158 5e-33 seq7 136 2e-26 seq226 132 2e-25 seq116 120 1e-21 seq113 105 3e-17 seq1 105 3e-17 seq14 93.3 2e-13 seq139 86.0 2e-11 seq19 84.2 9e-11 >seq45 Length=119008 Score = 208 bits (230), Expect = 3e-48 Identities = 1057/1647 (64%), Gaps = 72/1647 (4%) Strand=Plus/Minus Query 450920 GGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTAGAA 450979 || |||||||||||||| || | ||||| || ||||| | ||||||| || || Sbjct 89987 GGCATTGATCTTGGAACAACGTACTCATGCGTTGGTGTGTGGCAAAATGATCGAGTCGAG 89928 Query 450980 ATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACGGATTCA 451039 || || || ||||| || ||| ||||| || ||||| | || |||||| ||| | Sbjct 89927 ATCATTGCGAATGATCAGGGAAATCGAACGACACCTTCGTATGTCGCTTTTACAGATACG 89868 Query 451040 GAAAGACTTTTAGGGCAAGCTGCTAA--ATCAATGGTAAATTCAAATGCCAAAAACACAG 451097 || ||||| | || | || || || | ||| | || ||||| | |||||| | Sbjct 89867 GAGAGACTGATTGGTGACGCAGCGAAGAACCAAGTGGCTATG--AATGCAACAAACACTG 89810 Query 451098 TATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTA---CAAAAAG 451154 | | || || ||||| || ||||| || | || || | |||| |||| ||| | Sbjct 89809 TTTTCGACGCGAAACGATTGATTGGTCG-ACGT-TGTAG-TGATCCTGTGGTTCAAGCTG 89753 Query 451155 AGA--AAAAATT--CTTTTCTTA-TGA--TGTAGTAAATCAAAAAGGAAAGCCCTAT-AT 451206 | | ||| ||| | |||| | | | | |||| || | | | || | || || Sbjct 89752 ATATCAAACATTGGCCTTTCAAAGTTACTTCTAGTGAAGGAGACAAGA-----CGATGAT 89698 Query 451207 TCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGT 451266 | || | || ||||||||||| ||| | ||| || ||||| || || || ||||| Sbjct 89697 TACCGTCCAATACAAAGGTGAAACAAAATCCTTTCGACCGGAAGAGATATCTTCAATGGT 89638 Query 451267 TCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGT 451326 | | | ||||||| ||||| || ||| | | | ||| || | | || || Sbjct 89637 TTTAATCAAAATGAGAGAAATTGCCGAAGCTTTTCTCGGTAAAGATGTCAAAAACGCGGT 89578 Query 451327 AATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACA 451386 |||||||| || || || || ||||| | || || || || || || || ||||| Sbjct 89577 TATTACTGTACCTGCATACTTTAATGACTCGCAGCGTCAGGCGACCAAGGACGCAGGCGC 89518 Query 451387 TATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATA 451446 ||||| || |||||||| || || || |||||||| || || ||||| ||| | || || Sbjct 89517 GATTGCAGGGTTAAATGTGCTGCGTATAATTAATGAGCCAACTGCAGCGGCTATCGCGTA 89458 Query 451447 TGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGG 451506 |||| | ||| || | | || ||| ||||||||| |||||||| ||||||| Sbjct 89457 TGGA-TTGGA----CAGGA-AGGGAGGCGAACGAAATATTTTGATATTTGATCTTGGTGG 89404 Query 451507 AGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAAC 451566 || || |||| || ||||| |||| ||||| || | || || || || ||||| Sbjct 89403 CGGCACATTTGATGTATCACTACTTACAATCGAAGAAGGCATTTTCGAGGTCAAAGCAAC 89344 Query 451567 CAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGTGGA----ATGGT 451622 | ||||||||| ||| | || || |||||| |||||||| | | || || | || Sbjct 89343 CGCTGGTGATACACATTTGGGCGGAGAAGATTTTGATAATCGACTAGTCGATCATTTTGT 89284 Query 451623 TGAAAACTGATGTTCAAC-GAAA--ACTAAAAGTAGATATTTCTACTAACCAAAAAGCAC 451679 || | || |||||| |||| | |||| |||||| | || || ||| |||| Sbjct 89283 TG----CCGA-ATTCAACAGAAAGCATCGAAAG--GATATTACAACAAATCAACGTGCAC 89231 Query 451680 TTAGACGTCTTAAAACATCAGCAGAAAAAGCTAAAATTACACTCAGTTCA---ACACAAA 451736 || | ||||| ||| | || ||| || || || |||| | ||| Sbjct 89230 TTCGCCGTCTACGCACAGCTTGTGAGCGAGCAAAGCGCACCCTTTCTTCATCCGCTCAAG 89171 Query 451737 CTACTAGTATAAACATTGA-TAGTTTAGTT-GATGGAATGGATTATGCTACTACTCTTAC 451794 | || || | ||||| | | | ||| || ||| |||||| | |||| | || Sbjct 89170 C-AC--ACATTGAAATTGACTCGCT--GTTCGAGGGAGTGGATTTCAATTCTACAATCAC 89116 Query 451795 CCGTGCTAAATTTGAATCAATTTGT-TCCAGTATTTTTGC-ACGGGTAATGAAACCTGTT 451852 | || ||| ||| |||| | | ||| | || | || |||| |||| || Sbjct 89115 GAGGGCACGATTCGAA--GATTTATGTGCAGATTACTTCCGTCGAACAATGGAACCAGTG 89058 Query 451853 GATCAAGTATTACATGATTCTAAAATTAGTAAAGATAAAATTGATGAAATTGTGCTTGTA 451912 || | || || | |||||||||| | ||| | | | | ||| |||| || || Sbjct 89057 GAGAAGGTGTTGCGTGATTCTAAATTGTCAAAAAGTCAGGTGCACGAAGTTGTACTCGTG 88998 Query 451913 GGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGTCTTCTTATTTTGGAGGAAAA 451972 || || || || || ||||||||| | ||| | | |||||| | ||| || || Sbjct 88997 GGTGGCTCGACTCGTATTCCTAAAGTGCAACAGCTATTGTCTGAGTTTTTCAACGGTAAG 88938 Query 451973 CAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCA 452032 || | || ||| |||| || || ||||| || || | |||||| | || ||||| Sbjct 88937 GAATTGTGCAAGTCGATAAACCCGGACGAAGCCGTCGCTTTTGGTGCAACTGTACAAGCC 88878 Query 452033 GCTATTCTAACAGGTTCAGATGA---TGAAAAATT--AGGAGATATTCTGTTAGTAGATG 452087 || ||| ||| || | || | ||||| | |||| ||| | || | |||| Sbjct 88877 GCCATTTTAAGTGGAACTGAGCAATCCGAAAAGCTGCAGGATCTAT--TACTATTGGATG 88820 Query 452088 TAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAAC 452147 | | || || || || ||| |||| ||||| |||||| ||||||| | | || || Sbjct 88819 TTGCTCCGCTGTCGCTGGGACTTGAGACAGCGGGTGGAGTGATGACCACACTGATCCCAC 88760 Query 452148 GAGGAACTTCTATTCCTTGTAAAAAGAGTCAAACATTT--AGTACAGCAAGTGATAACCA 452205 | || | | ||| |||||| ||||| ||| | | | ||| || ||||| Sbjct 88759 GTAATACCACGCTACCTACGAAAAAGTCTCAAATGTTTTCAACATACCAA--GAAAACCA 88702 Query 452206 ACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGAGATAATAATAA 452265 ||||||||| || ||||| ||||| ||||| || | ||||| || || || || Sbjct 88701 GCCAGGTGTATGCATACAAGTATTTGAGGGAGAGCGCTCCATGACTCGGGACAACAACCT 88642 Query 452266 ACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGA 452325 || ||| | || | |||| || || || ||||| | || ||||||||||| Sbjct 88641 TCTCGGAAAGTTCAATCTTGACGGAATACCGCCCATGCCGCGCGGTGTACCTCAAATTGA 88582 Query 452326 AATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATC 452385 | | || | ||| | ||||| ||||| ||| | ||||| || || | || ||||| | Sbjct 88581 AGTCACATTCGATATCGATGCCAATGGAATTTTGAATGTAAGCGCGATCGAGAAATCGAC 88522 Query 452386 TGGAAAATCAGAAAAAATTACAATTACTAATGATAAAAACCGTTTATCTAAAGAAGATAT 452445 || | | || ||||| || || || |||||| || | ||| ||| ||||| Sbjct 88521 CAACAAGGAAAATAAGATTACGATCACAAACGATAAAGGACGGCTGTCTCAAGCGGATAT 88462 Query 452446 TGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATGATGAA--CAAGTTAGAAAA 452503 || ||||| |||||| || |||| || | || |||||| ||| |||| Sbjct 88461 CGATCGTATGGTCAGTGAAGCTGAGAAATATAAAAAGGAGGATGAAGCCAA--CAGAATT 88404 Query 452504 CATGTTGAAGCTAAAAACAAACTAGAA 452530 | ||||||| || || ||||||| Sbjct 88403 CGAATTGAAGCAAAGAATGGACTAGAA 88377 >seq425 Length=20423 Score = 158 bits (174), Expect = 5e-33 Identities = 264/375 (70%), Gaps = 10/375 (3%) Strand=Plus/Plus Query 451233 AAACTTTT-GCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCA 451291 ||| |||| || ||||||||||| || | |||||||| |||||||| || | || Sbjct 7847 AAAGTTTTCGCACCTGAAGAAATCTCGGCCATGGTTCTCCAGAAAATGAAGGATATTGCT 7906 Query 451292 GAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAAT 451351 || || |||||| | | || | ||||| || | ||||| || || |||||||| Sbjct 7907 GAGAAAGTTATTGGAACAACTGTGAAGGATGCTGTGGTCACTGTCCCAGCATATTTCAAC 7966 Query 451352 GATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGA 451411 ||||| ||||| |||||||| |||||||| ||| ||| ||||| || | |||| || Sbjct 7967 GATGCTCAACGTCAAGCAACCAAAGATGCTGGATCTATCGCTGGATTGACCGTTCAACGT 8026 Query 451412 ATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACA 451471 || || ||||| || ||||| ||||| | || |||||| | | || |||| | Sbjct 8027 ATCATCAATGAGCCAACAGCTGCTGCGATTGCTTATGGAATTGACAA---GAAAGCTCAA 8083 Query 451472 GAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAAC--TC-ATGATACTTCTGTA 451528 | ||| || || | || |||||||| | ||||||||||| || ||| || ||| | Sbjct 8084 GGAGAGAAGAACGTATTGGTATTTGACCTCGGTGGAGGAACATTCGATGTCAC-TCTTT- 8141 Query 451529 CTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGA 451588 | | ||||| | ||| || ||||| ||| || || || || || |||||| | ||| Sbjct 8142 -TAGCCATTGATGGTGGAGTGTTTGAGGTACTTGCCACGAACGGAGACACTCATTTGGGA 8200 Query 451589 GGTGAAGATATTGAT 451603 || |||||| | ||| Sbjct 8201 GGAGAAGATTTCGAT 8215 >seq7 Length=223839 Score = 136 bits (150), Expect = 2e-26 Identities = 247/361 (68%), Gaps = 8/361 (2%) Strand=Plus/Plus Query 451247 GAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGT 451306 ||||| ||||| | |||||| | | || ||| || | |||||| ||| | || Sbjct 43805 GAAGAGATTTCGGCAATGGTTTTATCGAAGATGCGGGAGATAGCAGAGGCGTATCTAGGA 43864 Query 451307 TCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAA 451366 || ||| | | || || | || || || || || || || ||| | || |||||| Sbjct 43865 CGTCAAGTGAAGAACGCGGTCGTCACCGTCCCGGCGTACTTTAACGATTCTCAGCGGCAA 43924 Query 451367 GCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCT 451426 ||||| |||||||||||| |||||||| ||||||| || |||||| | || || ||| Sbjct 43925 GCAACGAAAGATGCAGGAGTAATTGCTGGAATAAATGTACTCCGAATTCTCAACGAGCCT 43984 Query 451427 ACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAA-ACAGAAGaaaaaaaTAT 451485 || ||||| ||| ||||||| ||||| | | ||||| | |||| | || | Sbjct 43985 ACCGCAGCAGCTATAGCATACGGACT-------TGACAAGAAGGGTGGAGAACACAACGT 44037 Query 451486 TTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGG 451545 || | || || ||||||| ||||| |||| || | || | || ||||| || Sbjct 44038 GCTAATTTTCGACCTTGGTGGTGGAACGTTTGATGTGTCGTTGCTCACGATCGAAGAAGG 44097 Query 451546 GGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 ||| |||||||||| || || |||||| || ||| | || |||||||| |||| || Sbjct 44098 GGTTTTTGAAGTAAGAGCTACGGCTGGTGACACACATTTGGGTGGTGAAGACTTTGACAA 44157 Query 451606 T 451606 | Sbjct 44158 T 44158 Score = 132 bits (146), Expect = 2e-25 Identities = 455/705 (65%), Gaps = 27/705 (4%) Strand=Plus/Plus Query 450913 AGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAA 450972 ||||||||| ||||||||||| || || | |||||||| ||||| | ||||||| Sbjct 47187 AGCAATTGGTATTGATCTTGGTACAACTTACTCATGTGTGGGTGTCTGGCAAAATGATCG 47246 Query 450973 TGTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTAC 451032 || |||||||| || || ||||||||| ||||| ||||| || | || ||| || Sbjct 47247 AGTCGAAATTATTGCTAACGACCAAGGAAACCGAACCACTCCGTCCTACGTTGCTTTCAC 47306 Query 451033 GGATTCAGAAAGACTTTTAGGGCAAGCTGCT--AAATCAATGGTAAATTCAAATGCCAAA 451090 || | ||| | ||| | || | || ||| ||| ||| ||| || || | Sbjct 47307 CGACACTGAACGTCTTATTGGTGATGCCGCTAAAAACCAA--GTAGCCATGAACGCAGCA 47364 Query 451091 AACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAA 451150 ||||| || | || || |||||||| ||||| || | | | || | || ||| Sbjct 47365 AACACCGTCTTCGACGCCAAACGTTTGATTGGTCGAACTTTTTCGGACCCAATCGTCCAA 47424 Query 451151 AAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGA---------AAGCCC 451201 || | || || | | | | ||| |||||| ||| |||||| Sbjct 47425 GCTGACATGAAGCACTGGCCAT-TCA--CAGT---TCAAAACGGACCTGGCAACAAGCCC 47478 Query 451202 TATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCT 451261 | || |||| | | ||| ||||||| |||| |||| |||||||||||||| || Sbjct 47479 TTGATCGAAGTCACCTTTAAGGGTGAAAAGAAAATTTTTCAACCTGAAGAAATTTCCTCA 47538 Query 451262 ATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGAT 451321 ||||| || || ||| ||| | ||| || || || | ||| | || Sbjct 47539 ATGGTGCTCGTAAAGATGCGTGAAGTCTCTGAAGCGTACATCGGAAAGCAAGTGAAGAAT 47598 Query 451322 GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCA 451381 || || || || || || || || ||||| ||| | ||||| ||||| || ||||| || Sbjct 47599 GCCGTCATCACCGTACCAGCATACTTCAACGATTCCCAACGTCAAGCTACCAAAGACGCG 47658 Query 451382 GGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTA 451441 || || || ||||| || || |||||||| || |||||||| || |||||||| | Sbjct 47659 GGTGCGATCGCCGGTTTGAACGTGCTTCGAATCATCAATGAACCAACTGCAGCTGCCATT 47718 Query 451442 GCATATGGACTAGGAAAATCAAAAGAAA-CAGAAGaaaaaaaTATTTTAGTATTTGATTT 451500 || || || ||| | |||||| ||||| ||| | | | || ||| | Sbjct 47719 GCGTACGGTTTAG-------AGAAGAAAGGTCAAGAATGCAATGTGCTCATCTTCGATCT 47771 Query 451501 TGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAA 451560 ||||||||| || ||| || | | | ||||| || || | |||||||| || Sbjct 47772 TGGTGGAGGTACATTCGATGTGTCCTTGTTGACCATTGAGGACGGAATTTTTGAAGTTAA 47831 Query 451561 GGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 || || ||| || || || | || ||||||||| |||| || Sbjct 47832 AGCCACAGCTGGAGACACCCACTTGGGTGGTGAAGATTTTGACAA 47876 Score = 102 bits (112), Expect = 3e-16 Identities = 378/583 (65%), Gaps = 12/583 (2%) Strand=Plus/Plus Query 451896 ATGAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGTCTT 451955 ||||||| ||| | || || || || || ||||| || ||| | ||| | ||||| || Sbjct 44448 ATGAAATCGTGTTGGTCGGTGGCTCCACGCGAATCCCAAAAGTACAACAAATGTTATCCG 44507 Query 451956 CTTATTTTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATATG 452015 || ||| |||||| | || | ||| | ||||| || || || || ||||| | Sbjct 44508 ATTTTTTCAACGGAAAAGAGCTCTACAAGTCAATCAATCCCGACGAGGCAGTCGCATACG 44567 Query 452016 GTGCTGCAGTTCAAGCAGCTATTCTAACAGGT---TCAGATGA---TGAAAAATTAGGAG 452069 ||||| | || || || ||||| || | ||| || ||| | ||| | || Sbjct 44568 GTGCTACGGTCCAGGCCGCTATCCTCAGTGGTGGTTCGGATCAATCTGAGAGGCTACAGA 44627 Query 452070 ATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGA 452129 || || || | |||| || | || | || | || | || || || |||||| ||| Sbjct 44628 ATGTTGTGCTTTTAGACGTTGCTCCATTGTCAATGGGGCTCGAGACTGCCGGTGGAGTGA 44687 Query 452130 TGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAGTA 452189 ||||| || ||| |||| || | | || || ||| || || ||| | Sbjct 44688 TGACTGTCTTGATTGCACGAAATACGACCGTGCCCACTAGAAAATCGCAGACGTTTTCGA 44747 Query 452190 CAGCAAGT-GATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATG 452248 | | | | ||||| || || || || ||||||| ||||| || || ||||| Sbjct 44748 C-GTATGCCGATAATCAGAGTGGAGTCTTGATACAAGTGTACGAAGGTGAGCGGTCAATG 44806 Query 452249 ACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCAAACA-TTCCTCCTATGCCAAG 452307 || || || || || ||||| |||| | ||| | | |||| || |||||| | Sbjct 44807 ACTCGCGACAACCATTTGCTAGGTAAATTCAA-CTTGGAGGGAATTCCGCCAATGCCACG 44865 Query 452308 GGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAG 452367 || |||||||| ||| | |||| ||| || ||||| ||||||||||| | ||| | Sbjct 44866 AGGTGTGCCTCAAATCGAAGTAACCTTTGAAGTCGATGCGAATGGTATTCTCAGTGTTAC 44925 Query 452368 TGCAGTTGAAAAATCATCTGGAAAATCAGAA-AAAATTACAATTACTAATGATAAAAACC 452426 ||| ||||| || || | || || |||| ||||| || || || ||||| || | Sbjct 44926 TGCGGTTGAGAAGTCGACCGG-TAAGGAGAATAAAATCACGATAACGAATGACAAGGGAC 44984 Query 452427 GTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGA 452469 || |||| || || || || || ||||||| | ||||| || Sbjct 44985 GTCTATCAAAGGAGGAAATAGATCGAATGGTACAAGAAGCCGA 45027 >seq226 Length=41712 Score = 132 bits (146), Expect = 2e-25 Identities = 139/183 (76%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | |||||||| || ||||| || || ||||| || |||||||| || |||||||| Sbjct 24305 AATGCAGATTTTCGTCAAGACACTCACCGGGAAAACAATCACTCTTGAGGTCGAATCATC 24246 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | || || | | || || |||||||| ||||||||||||||||| || || Sbjct 24245 CGACACGATCGATAATGTGAAGGCGAAGATTCAAGACAAGGAAGGAATTCCTCCCGACCA 24186 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| ||||| |||||| |||| |||||| | || || || |||| | |||||||| || Sbjct 24185 ACAGCGTTTGATTTTCGCAGGAAAACAATTGGAGGACGGCCGAACGCTCGCGGATTACAA 24126 Query 391229 TAT 391231 || Sbjct 24125 CAT 24123 >seq116 Length=69695 Score = 120 bits (132), Expect = 1e-21 Identities = 250/371 (67%), Gaps = 10/371 (3%) Strand=Plus/Minus Query 451244 CCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATT 451303 ||||||||||| || ||||||| || || |||||||||||| || ||| ||| | Sbjct 40966 CCTGAAGAAATCTCTGCTATGGTGCTCACGCGAATGAAAGAAACCGCTGAAGCATACCTC 40907 Query 451304 GGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGG 451363 || || | | | || || | || || || || ||||||||||| ||||| Sbjct 40906 GGACAGCCCATCAAACAAGCGGTTGTGACCGTCCCTGCGTATTTCAATGACCACCAACGT 40847 Query 451364 CAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAA 451423 ||| | || |||||||| ||| |||||||||||| | || ||||| || ||||| Sbjct 40846 CAATCGACCAAAGATGCCGGATCGATTGCTGGTTTAGACGTGAAGCGAATCATCAATGAG 40787 Query 451424 CCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAA--AAGAAACAGAAGaaaaa- 451480 || || |||||||| | || || || || | | | ||| | | | || | ||| Sbjct 40786 CCCACTGCAGCTGCCTTGGCGTACGGTCTTG--ACACCAACGCTGGATCTGATGGCAAAG 40729 Query 451481 -----aaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAA 451535 ||| | | | |||||| | ||||| ||||| |||| ||| | ||| | Sbjct 40728 CCTGTAATGTGCTCATCTTTGATCTCGGTGGTGGAACATTTGATGTTTCAATTCTTCGTA 40669 Query 451536 TTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAG 451595 ||||| |||| | |||||||| || || ||| ||| || || ||| | || ||||||| Sbjct 40668 TTGAAAATGGTATTTTTGAAGTCAAAGCTACCGGTGGAGACACACATTTGGGTGGTGAAG 40609 Query 451596 ATATTGATAAT 451606 || | |||||| Sbjct 40608 ATTTCGATAAT 40598 Score = 93.3 bits (102), Expect = 2e-13 Identities = 162/230 (70%), Gaps = 12/230 (5%) Strand=Plus/Minus Query 451898 GAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGTCTTCT 451957 |||||||||||||| || || || || || ||||||||| |||| | | || || || Sbjct 40303 GAAATTGTGCTTGTGGGTGGATCCACTCGTATTCCTAAAGTTCAGAACCTCTTATCCGCT 40244 Query 451958 TATTTTGGAGGAAAACAACTATGTAAGAGCG-TAAATCCTGATGAAGCTGTTGCATATGG 452016 |||||| || || || | | || | || | |||||||||||||| |||||||| || Sbjct 40243 GTTTTTGGTGGCAAGGAATTGTCGAA-ATCGATCAATCCTGATGAAGCAGTTGCATACGG 40185 Query 452017 TGCTGCAGTTCAAGCAGCTATTCTAACAGG--TTC-AGATGATGAAA--AATTAGGAGAT 452071 || ||||| || | ||||||||| || ||| |||||| || |||| | Sbjct 40184 GGCAGCAGTCCAGGGAGCTATTCTCGATGGAATTCGCAATGATGCAACGAATT-----CT 40130 Query 452072 ATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGG 452121 | |||| || ||||| || || |||| || || ||||||||| ||| Sbjct 40129 CTCTTGTTGGTCGATGTGACGCCCTTATCGCTGGGTATTGAAACAGTTGG 40080 >seq113 Length=71740 Score = 105 bits (116), Expect = 3e-17 Identities = 236/349 (68%), Gaps = 13/349 (4%) Strand=Plus/Minus Query 451251 AAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTC 451310 ||||| || ||||| ||| | |||||||| ||||||||||| || | | ||| || Sbjct 31273 AAATTGGGTCAATGGTACTTGCCAAAATGAAGGAAACAGCAGA-CAGTTTTCTGGGTCAA 31215 Query 451311 -CAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCA 451369 |||| | | || || ||||| || || ||||||||||| || | ||||| ||||| Sbjct 31214 TCAGTGTCCCAAGCTGTCATTACCGTCCCAGCTTATTTCAACGACTCTCAACGACAAGCC 31155 Query 451370 ACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACA 451429 || || ||||| ||| | || || || || |||| | || || || || ||||| || Sbjct 31154 ACCAAGGATGCTGGAAAAATCGCAGGCTTGGATGTGTTACGTATCATCAACGAACCCACC 31095 Query 451430 GCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTA 451489 || ||||| |||| |||||| | ||| || | | || | ||| ||| Sbjct 31094 GCCGCTGCGTTAGCGTATGGAAT-GGACAA--------AGCGGATGGTAAAGTAATTGCG 31044 Query 451490 GTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTA 451549 ||||||||||| || || ||||| |||| || | | ||| | || || Sbjct 31043 GTATTTGATTTGGGAGGTGGAACATTTGATGTATCAATTTTGGAAATCTCTGGCGGTGTT 30984 Query 451550 TTTGAAGTAAAGGCAACCAATGGTGATAC-TCATCTAGGAGGTGAAGAT 451597 |||||||| || | |||||||| || || | || | ||||| |||||| Sbjct 30983 TTTGAAGTCAAATCGACCAATGGAGACACGTTAT-TGGGAGGCGAAGAT 30936 >seq1 Length=398508 Score = 105 bits (116), Expect = 3e-17 Identities = 102/131 (78%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 391077 GGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATTGAAGCTATTAAACAAAAA 391136 || ||||| ||||| || || || |||||| | || | ||||| | | || || Sbjct 11375 GGAAAAACAATTACACTCGAAGTAGAATCAGCGGACACGATTGACAATGTCAAGAGCAAG 11316 Query 391137 ATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAA 391196 |||||||| |||||||||||||||||||| ||||||||| ||||||| | || |||||| Sbjct 11315 ATTCAAGACAAGGAAGGAATTCCTCCTGACCAACAACGTCTAATTTTTGCCGGAAAACAA 11256 Query 391197 CTTGAAGATGG 391207 |||||||| || Sbjct 11255 CTTGAAGACGG 11245 >seq14 Length=192039 Score = 93.3 bits (102), Expect = 2e-13 Identities = 141/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 364653 AAAGTAGCTCAATTAGCAGGTTTTGTATCTGACCGGGTAGCTTATCATCACGGTGAGGCA 364712 ||||| || ||| | || |||| |||||| || | ||||||| || || || ||| Sbjct 81461 AAAGTGGCACAACTCGCCGGTTATGTATCAGAGCATTCGTCTTATCACCATGGAGAAGCA 81520 Query 364713 AGTTTAATGGGAGCAATAATTGGAATGGCACAAAATTTTGTTGGAAGTAATAATGTAAAT 364772 ||| | ||| | || ||| ||||| ||| | ||| |||||||||||| ||| Sbjct 81521 AGTCTGCATGGAACGATCATTAATATGGCTCAAGACTTTACCGGAAGTAATAATACGAAT 81580 Query 364773 TTACTAGAACCAAAAGGACAATTTGGAAGTCGAGTAATGGGAGGTAAAGATTCTGCCAGC 364832 || | ||||| |||||||| || | ||| || | || || |||||| |||| ||| Sbjct 81581 CTATTGTCTCCAAATGGACAATTCGGTACTCGGATACTTGGTGGGAAAGATGCTGCTAGC 81640 Query 364833 CCACGTTATATTTGGACCAAA 364853 || ||||| |||| |||||| Sbjct 81641 CCTCGTTACATTTTCACCAAA 81661 >seq139 Length=59190 Score = 86.0 bits (94), Expect = 2e-11 Identities = 116/159 (73%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 63898 CCTTGATCATCAAACCCATGAGTGATTTCATGAGCTATAACTACTCCAATTC-CTCCATA 63956 || ||| |||||| |||||||| | ||| ||||| || | |||||| | || | ||||| Sbjct 17323 CCATGACTATCAAAGCCATGAGTTAATTCGTGAGCAATGA-TACTCCCAATCGCGCCATA 17381 Query 63957 ATTTTGTGCAATCGTATAATCTAAACTaaaaaaaGGTGGTTGTAAAATAGCAGCTGGAAA 64016 | |||||| || || | ||| || |||| ||||||||| |||||||||| Sbjct 17382 AGCTTGTGCTTTCAGGTACCCGGGGTCAAAGAATGGTGCTTGTAAAATGCCAGCTGGAAA 17441 Query 64017 TACAATTTCATTTAATAAAGGATGATAATAAGCATTTAC 64055 || |||| |||| | | |||| |||||||||||| || Sbjct 17442 GACGATTTGATTTGACGACGGATTATAATAAGCATTCAC 17480 >seq19 Length=158918 Score = 84.2 bits (92), Expect = 9e-11 Identities = 128/180 (71%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 437622 ATAATTGGCTTAACACTTGAAACACGACCTGATTTTATTACTCCGAAAGAAATTACAATT 437681 ||||||||| | ||| | ||||| || || |||| || || || ||||| || | | Sbjct 125633 ATAATTGGCATCACATTGGAAACTCGTCCGGATTGCATCACGCCTGAAGAACTTCGACGT 125574 Query 437682 CTTCGAAGTTATGGATGTACCAGAGTACAACTTGGAATTCAACATATCAATGATGATATT 437741 |||| |||||||||||||| | || ||||| || | ||||||| | |||| ||| Sbjct 125573 TTTCGGCGTTATGGATGTACCCGTGTCCAACTGGGGGTACAACATACAGACGATGGGATT 125514 Query 437742 TTGAATTACATTAATCGAGGGTGTA-AACACAGTAAGTCAGTGAGAGCAATCAAACTACT 437800 | | | || ||||||||||||| ||| | | | || | |||||||| ||||| || Sbjct 125513 CTCACAAAAATCAATCGAGGGTGTACAACTGAAGATGCCA-TAAGAGCAATGAAACTGCT 125455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975586362739328