Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001078535.1_202014-05-15] 5,216 sequences; 34,452,595 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq271 129 7e-25 seq23 91.5 2e-13 >seq271 Length=35139 Score = 129 bits (142), Expect = 7e-25 Identities = 243/352 (69%), Gaps = 13/352 (4%) Strand=Plus/Plus Query 110692 CGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGAT 110751 ||||| |||| ||| || | |||||||| |||||| || || ||||| | || | || Sbjct 30617 CGTAGTTCCAGAAACTCAAAGATATCCGCGTGCCAGGGCTCTAGATAAATTGCAAAAGAC 30676 Query 110752 CCCTTACGACGACC--CGCCTGGTT-AACATAGCGTGCTGTGGCATTGAAGACCCTGAGC 110808 || || || || ||||| | | ||| || || |||||| ||||||| |||| ||| Sbjct 30677 CCTTTCCGCTTCCCACCGCCTTGATCAACGTATCGAGCTGTGTCATTGAACACCCGAAGC 30736 Query 110809 ATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATT---CTGGACTTATTGGCA 110865 || |||| |||||||| || ||||| || || | ||| ||| || ||| Sbjct 30737 ATTGGAACAATTCCATTCGAACTTCCATTCGTCCCGCGAATATAACTG---TTGGTGGAG 30793 Query 110866 CGAATGTCGTGGATATGCATAC--CAATACCACCCGCCCACTTACTAATTTGTGCACACT 110923 ||||| | |||| || | || ||||||| || |||||||| ||| ||||| | Sbjct 30794 CGAATAT--TGGAAATACTGACGCCAATACCGCCAGCCCACTTTGAAATACACGCACATT 30851 Query 110924 CTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAG 110983 | | || || | ||||| || || || ||||| | | ||| | |||||| || | Sbjct 30852 GTTTCAGCGTGTCGTAAATGCCGTCGATAGAATCATCTTGCATGGATAATAGAAAACACG 30911 Query 110984 AAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATG 111035 | || | || || |||||||||||||||||||| || || || || ||||| Sbjct 30912 ACGATAATTGGGGTCGAGGCGTTCCCGCATTGAAAAGCGTCGGAGTTGCATG 30963 >seq23 Length=155023 Score = 91.5 bits (100), Expect = 2e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 119496 GCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCA 119555 ||||| || ||| || |||||||| ||| |||||||||||| |||||||||||| Sbjct 36349 GCAAAGTCACAATGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCA 36408 Query 119556 GGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATG 119615 ||||| | ||||| |||||| |||||||| || | || || ||| || || ||||| Sbjct 36409 GGCATCAATCCTCGTTTCTTCAGCCAAAATATAGAGCAGAATGATCCGGAGAAAAAGATT 36468 Query 119616 CCCTCCAC 119623 || || || Sbjct 36469 CCTTCGAC 36476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588937598764800