Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001078535.1_202014-05-15] 5,216 sequences; 34,452,595 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq226 111 3e-19 seq1 105 1e-17 >seq226 Length=41712 Score = 111 bits (122), Expect = 3e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 194951 CTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGA 195010 ||||||| || |||||||| || || |||| || || || | || || |||||||| | Sbjct 24115 CTTTTTGGATGTTGTAATCCGCGAGCGTTCGGCCGTCCTCCAATTGTTTTCCTGCGAAAA 24174 Query 195011 TAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCT 195070 | | || |||||||| |||||||| ||||| ||||||||||| || ||| || || | Sbjct 24175 TCAAACGCTGTTGGTCGGGAGGAATTCCTTCCTTGTCTTGAATCTTCGCCTTCACATTAT 24234 Query 195071 CAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGA 195130 | || ||||| || ||| || ||||| || | || || || || | || || |||| Sbjct 24235 CGATCGTGTCGGATGATTCGACCTCAAGAGTGATTGTTTTCCCGGTGAGTGTCTTGACGA 24294 Query 195131 ACACTTGCATT 195141 | | |||||| Sbjct 24295 AAATCTGCATT 24305 >seq1 Length=398508 Score = 105 bits (116), Expect = 1e-17 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 194974 AGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGA 195033 ||||| | || ||||| || || || || || || || || ||||||||||| |||||| Sbjct 11236 AGAGTACGACCGTCTTCAAGTTGTTTTCCGGCAAAAATTAGACGTTGTTGGTCAGGAGGA 11295 Query 195034 ATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACT 195093 || ||||| ||||||||||| || |||||| || ||||| ||||||| ||| ||| Sbjct 11296 ATTCCTTCCTTGTCTTGAATCTTGCTCTTGACATTGTCAATCGTGTCCGCTGATTCTACT 11355 Query 195094 TCAAGGGTAACCGTCTTTCCT 195114 || || |||| || |||||| Sbjct 11356 TCGAGTGTAATTGTTTTTCCT 11376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109407453344672