Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001078535.1_202014-05-15] 5,216 sequences; 34,452,595 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq23 257 2e-63 >seq23 Length=155023 Score = 257 bits (284), Expect = 2e-63 Identities = 594/881 (67%), Gaps = 22/881 (2%) Strand=Plus/Plus Query 36890 ATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCTAGTGATATATTTTCCAT 36949 |||||||||||| ||| | || ||||| ||||| ||||||| || || || | ||||| Sbjct 36060 ATATTCTCCAACGCGTTTCTCAAAAAAGTTTGTTTTTCCTTGCAGAGAAATCATATCCAT 36119 Query 36950 AAAATCAAATGGATTAGATGTATTATATATAGTACTACATGATAATTCCTTCAGA-AGCC 37008 | ||||| |||||||| | | ||||| | || | | || | | | | | | Sbjct 36120 CCAGTCAAAGGGATTAGAAGCGTGATATAACTTGCTG-ACGCCAAGTGCATGTAACAATC 36178 Query 37009 TATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATTAGTTTTA 37068 |||||| ||||| || ||||||| || ||| | | || || |||||||| | | Sbjct 36179 GATCCGCCACAAACTCGATGTATTGACCCATCAAACTTGAATTCATTCCAATTAGCTCGA 36238 Query 37069 CTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTATATTAA 37128 |||||| || |||| | | |||| || ||| || || || || || || || | Sbjct 36239 CTGGAAGTGAATCTCGTACAAATTCTTGTTCGATGATAACGGCGTCGGAAATGATTGCAT 36298 Query 37129 CAATAACTTCTTCAGTTGGGGGATATTTTAAATATTTAA--ACAATAAACATGCAAAATC 37186 |||| |||| | | | ||||| | || | ||| | ||||||||| || Sbjct 36299 GAATAGAGCCTTCTG--GAAGCTTATTTACCAGTTTCGAGTACATCAGACATGCAAAGTC 36356 Query 37187 ACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAA 37246 |||||||| |||||||| | ||| || | ||||| |||||| | ||| ||||| || Sbjct 36357 ACAATGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCAGGCATCAA 36416 Query 37247 ACCTCtttttttAATCCAAAATATTGCTGCAAAA-GATCCAGAAAAGAAAATACCTTCAA 37305 |||| ||| || | ||||||||| | ||| || ||||| || || || || ||||| | Sbjct 36417 TCCTCGTTTCTTCAGCCAAAATATAGA-GCAGAATGATCCGGAGAAAAAGATTCCTTCGA 36475 Query 37306 CTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAA--CTATA-ATCAGAAATCCAtt 37362 | || ||||| ||||| | | | | || | | | || | ||| | ||||| Sbjct 36476 CGGCCGCAAAGGCTACCACTCTTTCTGCAAACGAGGCATACTTTGGATCGCA---CCATT 36532 Query 37363 tttttGTCCAATCTGCCTTTAATT-TAACACATTCAATTGTTTCAATTGCTTTTAAGAGA 37421 | | ||| | ||| |||| | |||| || ||||||||||| || | || Sbjct 36533 TCAACGCCCATTGTGC-TTTATTGGTAACGCACGGGATTGTTTCAATCGCGC---ACAGT 36588 Query 37422 AAGtttttttCTTCACT---ATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCA 37478 || | | || |||| | |||| | || || |||||||| | ||| ||||| ||| Sbjct 36589 AAATGCTGTTTTTCAGTTGGATCTTTGATGTATGTATCAATCAATAACGAATACACTTCC 36648 Query 37479 GAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGA 37538 ||||| |||||||| || || || ||||| || ||||| || | |||||| | | ||| Sbjct 36649 GAGTGTATATTTTCTATTGCAATTTGAAATCCGTAAAAGCATCGAGCTTCGGGGATCTGA 36708 Query 37539 ACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAG 37598 || || | || || | || | |||||||| || || |||||||| ||||||||| Sbjct 36709 ACCTCACTGCTGAAATTCATGGCGAGATTTTCATTGACAATTCCATCACTGGCTGCAAAG 36768 Query 37599 AAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTTTCCAATCATTA 37658 || || | || | ||| ||||| |||||||||| | |||| || ||| ||||| Sbjct 36769 AAGGCCAACACGTGTTTGATAAAGTGTCTTTCATTGTCCGATATATTAAGCCAGTCATTC 36828 Query 37659 ATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGCCAATGCACGTTTATAC 37718 || || | ||||| | ||| || |||||||||| |||||| ||| |||||| Sbjct 36829 ATGTCATGCACCAAATCGATTTCTTCTGCGGTCCAAAAGCTTGCCTCTGCTTTCTTATAC 36888 Query 37719 ATCGTCCAAATATCATTATGTTGTATTGGAAATATTACAAA 37759 || |||||| ||| |||||||| ||||||| ||||| Sbjct 36889 ATGTCCCAAATCTCAGATTGTTGTATCGGAAATAAGACAAA 36929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592278180944640