Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001078535.1_202014-05-15] 5,216 sequences; 34,452,595 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq226 96.9 6e-15 seq1 89.7 9e-13 >seq226 Length=41712 Score = 96.9 bits (106), Expect = 6e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || ||||||||||| || ||||| || | |||||| || ||||| |||||||| || Sbjct 24150 TCCTCCAATTGTTTTCCTGCGAAAATCAAACGCTGTTGGTCGGGAGGAATTCCTTCCTTG 24209 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| || || | || | ||| || || ||||| || || || || ||||| || Sbjct 24210 TCTTGAATCTTCGCCTTCACATTATCGATCGTGTCGGATGATTCGACCTCAAGAGTGATT 24269 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 ||||| || || || || || || || || |||||| Sbjct 24270 GTTTTCCCGGTGAGTGTCTTGACGAAAATCTGCATT 24305 >seq1 Length=398508 Score = 89.7 bits (98), Expect = 9e-13 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | |||||||||||||||||||| | ||||| |||||||| |||||||| || Sbjct 11248 TCTTCAAGTTGTTTTCCGGCAAAAATTAGACGTTGTTGGTCAGGAGGAATTCCTTCCTTG 11307 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| || ||| | || | ||| ||| || || | || || ||||| || || || Sbjct 11308 TCTTGAATCTTGCTCTTGACATTGTCAATCGTGTCCGCTGATTCTACTTCGAGTGTAATT 11367 Query 193326 GTTTTACCTGTT 193337 ||||| ||| || Sbjct 11368 GTTTTTCCTATT 11379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899595742533120