Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001078535.1_202014-05-15] 5,216 sequences; 34,452,595 total letters Query= NC_029021.1 Length=60747 Score E Sequences producing significant alignments: (Bits) Value seq134 102 3e-17 seq43 102 3e-17 >seq134 Length=61583 Score = 102 bits (112), Expect = 3e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 30351 GCAATCTGGTTAGTTAAACGTTCTTGGACTTGCAAACGTCGAGCGAAAGCATCAACTACC 30410 || ||||| || || | ||||||||||||||| ||||||| || || |||| || Sbjct 1739 GCTATCTGCTTTGTAAGACGTTCTTGGACTTGTAAACGTCTCGCAAACACATCTGAGACT 1680 Query 30411 CGAGATAACTTGCTGAGACCGACAATTTTTCCATTTGGAACATATCCAACCACCGCATGA 30470 |||| ||||||||||| || | | || ||||| |||| ||| |||| | | Sbjct 1679 CGAGCCAACTTGCTGAGTCCCAAGACCTTACCATTGGGAATATACCCAATGTGTACCTTC 1620 Query 30471 CCAATAATAGGAGCCATGTGATGCTCACAATGACTATATACAGGGATATCGCGAACGATG 30530 || || | ||| | ||||||||||||||| | ||| | | ||||||||| ||||| Sbjct 1619 CCGATGAAAGGCACAATGTGATGCTCACAAAGCGAATACAAATCGATATCGCGCACGATT 1560 Query 30531 ACCATTTCATC 30541 |||||||| || Sbjct 1559 ACCATTTCGTC 1549 >seq43 Length=120702 Score = 102 bits (112), Expect = 3e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 30351 GCAATCTGGTTAGTTAAACGTTCTTGGACTTGCAAACGTCGAGCGAAAGCATCAACTACC 30410 || ||||| || || | ||||||||||||||| ||||||| || || |||| || Sbjct 87402 GCTATCTGCTTTGTAAGACGTTCTTGGACTTGTAAACGTCTCGCAAACACATCTGAGACT 87343 Query 30411 CGAGATAACTTGCTGAGACCGACAATTTTTCCATTTGGAACATATCCAACCACCGCATGA 30470 |||| ||||||||||| || | | || ||||| |||| ||| |||| | | Sbjct 87342 CGAGCCAACTTGCTGAGTCCCAAGACCTTACCATTGGGAATATACCCAATGTGTACCTTC 87283 Query 30471 CCAATAATAGGAGCCATGTGATGCTCACAATGACTATATACAGGGATATCGCGAACGATG 30530 || || | ||| | ||||||||||||||| | ||| | | ||||||||| ||||| Sbjct 87282 CCGATGAAAGGCACAATGTGATGCTCACAAAGCGAATACAAATCGATATCGCGCACGATT 87223 Query 30531 ACCATTTCATC 30541 |||||||| || Sbjct 87222 ACCATTTCGTC 87212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194256766990528