Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001078535.1_202014-05-15] 5,216 sequences; 34,452,595 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq226 111 4e-19 seq498 102 2e-16 >seq226 Length=41712 Score = 111 bits (122), Expect = 4e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 225524 CTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGA 225583 ||||||||| |||||||| || | |||| || || || | || || || ||||| | Sbjct 24115 CTTTTTGGATGTTGTAATCCGCGAGCGTTCGGCCGTCCTCCAATTGTTTTCCTGCGAAAA 24174 Query 225584 TAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTT 225643 | | || ||||||||||| ||||| |||||||||||||| ||||| ||||||| | Sbjct 24175 TCAAACGCTGTTGGTCGGGAGGAATTCCTTCCTTGTCTTGAATCTTCGCCTTCACATTAT 24234 Query 225644 CGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGA 225703 |||| ||||| || | ||| || || | ||||| || || || || | || || | || Sbjct 24235 CGATCGTGTCGGATGATTCGACCTCAAGAGTGATTGTTTTCCCGGTGAGTGTCTTGACGA 24294 Query 225704 ACACTTGCATT 225714 | | |||||| Sbjct 24295 AAATCTGCATT 24305 >seq498 Length=16471 Score = 102 bits (112), Expect = 2e-16 Identities = 84/100 (84%), Gaps = 3/100 (3%) Strand=Plus/Plus Query 6769 GAGAGAATGATCAGCCACATTGGGACTGA-AAACGGCCCAAGTCTTCTAAAAG--GGCAG 6825 || |||| ||||||||||||||||||||| ||||||||||| || ||||| ||||| Sbjct 819 GAAAGAACGATCAGCCACATTGGGACTGAGAAACGGCCCAAACTTTTTAAAAAAAGGCAG 878 Query 6826 CAGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAG 6865 ||||| |||| || ||||||| |||||||||||||| || Sbjct 879 CAGTGAGGAATTTTGGACAATGAGCGAAAGCTTGATCCAG 918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192451503139904