Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001078535.1_202014-05-15] 5,216 sequences; 34,452,595 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq1 105 2e-17 >seq1 Length=398508 Score = 105 bits (116), Expect = 2e-17 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 177947 AGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAA 178006 ||||||||| || || ||||| || ||| | ||||| || || || ||||| || Sbjct 11376 AGGAAAAACAATTACACTCGAAGTAGAATCAGCGGACACGATTGACAATGTCAAGAGCAA 11317 Query 178007 GATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACA 178066 |||||| ||||| |||||||| ||||| ||||| ||||| || || || ||||||||||| Sbjct 11316 GATTCAAGACAAGGAAGGAATTCCTCCTGACCAACAACGTCTAATTTTTGCCGGAAAACA 11257 Query 178067 GCTCGAAGATGGAAGGACTCT 178087 || ||||| || | ||||| Sbjct 11256 ACTTGAAGACGGTCGTACTCT 11236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203650754643904