Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1629 116 8e-21 seq2777 107 4e-18 >seq1629 Length=81605 Score = 116 bits (128), Expect = 8e-21 Identities = 129/172 (75%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 319854 AGAGGGGAACCCTTCAAGCTGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGC 319913 ||| || || ||||| || |||||||| | || || | |||||| ||||||||||| Sbjct 62246 AGACGGAAATCCTTCCAGTTGGCCGTTAGCGATGGCTCTCATCAGCGTTGATTTACCGCA 62187 Query 319914 CCCGTTTGGCCCACACAGACCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTT 319973 || ||||| ||||| ||||| || || | ||| | |||| ||||| | |||||| Sbjct 62186 TCCATTTGGACCACAGAGACCATAACGATGTCCTCTCTTCAAACGCAACCGGGCGTTGTT 62127 Query 319974 CAGAAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCC 320025 ||| ||||| | |||||||| |||| ||| || ||||||| ||| |||||| Sbjct 62126 CAGTAGAATCATACCACCATACGCCAAAGAGAACTCACAATTACATAGATCC 62075 >seq2777 Length=294 Score = 107 bits (118), Expect = 4e-18 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||| |||||||||||| |||||||||| ||||| ||||||| ||||||||||||||||| Sbjct 48 TGCCTGTCTAGCTCAGTTGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAG 107 Query 165769 CCCCACGATGGGCA 165782 ||||||| |||||| Sbjct 108 CCCCACGGTGGGCA 121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057773242629350