Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq1262 84.2 3e-11 seq2980 82.4 9e-11 >seq1262 Length=79744 Score = 84.2 bits (92), Expect = 3e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| |||| |||||||||||||| | ||||| |||||| Sbjct 77482 CTCCCCGACCGGGAATTGAACCCGGGTCCCCCGCGTGACAGGCAGGTATACTAGCCACTA 77423 Query 60126 TACTACCGAGGATTGA 60141 ||||| |||||||||| Sbjct 77422 TACTATCGAGGATTGA 77407 >seq2980 Length=62866 Score = 82.4 bits (90), Expect = 9e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| |||| |||||||||||||| | ||||| |||||| Sbjct 3 CTCCCCGACCGGGAATTGAACCCGGGTCCCCCGCGTGACAGGCAGGTATACTAGCCACTA 62 Query 60126 TACTACCGAGGATTGAATAT 60145 ||||| |||||||| |||| Sbjct 63 TACTATCGAGGATTTGATAT 82 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571790831788600