Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq655 100 2e-16 seq25 87.8 1e-12 >seq655 Length=45005 Score = 100 bits (110), Expect = 2e-16 Identities = 136/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 34200 CTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAA 34259 |||| || |||||||| || | ||| ||| |||| ||||| || || |||||||||| Sbjct 27415 CTTTTTGGATGTTGTAATCCGCGAGCGTTCGGCCGTCCTCCAATTGTTTTCCTGCGAAAA 27474 Query 34260 TGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGG 34319 | | ||||| |||||| || | | |||||||| ||||| ||| | || Sbjct 27475 TCAAACGCTGTTGGTCGGGAGGAATTCCTTCCTTGTCTTGAATCTTCGCCTTCACATTAT 27534 Query 34320 CTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAA 34379 | || | |||| |||||||| || | ||||| ||||| |||||||| ||||| || | Sbjct 27535 CGATGGTGTCGGATGATTCGACCTCAAGAGTGATTGTTTTCCCGGTGAGTGTTTTGACGA 27594 Query 34380 AGATCTGCAT 34389 | |||||||| Sbjct 27595 AAATCTGCAT 27604 >seq25 Length=104834 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || || || | ||||||| ||| || || ||||||||| |||||||| || | Sbjct 78422 TCCACCACGAAGACGTAGCACCAAGTGCAACGTTGATTCTTTCTGGATGTTGTAATCCGC 78481 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || ||| |||| || | || || || ||||| || || || ||||| || || Sbjct 78482 AAGAGTACGTCCGTCTTCTAGTTGTTTTCCAGCGAAGATCAGACGTTGCTGATCAGGAGG 78541 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | || ||||| ||||| ||||| || | |||| || | || || || Sbjct 78542 AATTCCTTCTTTGTCTTGAATCTTGGCCTTTACATTATCGATCGTGTCTGAAGACTCAAC 78601 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| |||||||| || || || || ||||||||||| |||||||| Sbjct 78602 TTCCAAAGTGATGGTCTTTCCAGTAAGCGTTTTCACAAAAATCTGCAT 78649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323057254287200