Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq2423 306 5e-78 seq3629 237 2e-57 >seq2423 Length=50609 Score = 306 bits (338), Expect = 5e-78 Identities = 1432/2248 (64%), Gaps = 52/2248 (2%) Strand=Plus/Minus Query 78748 GTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTC 78807 || || |||||||||||||| || || ||||| ||||| ||||||||||||| Sbjct 21396 GTTCGGAGATAGTACATTCCTGTCTTGAGACCTTTTTTCCATGCGTAGAAATGCATCGAA 21337 Query 78808 GTTAGTTTGGAATAAC--TCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGA 78865 || ||||| | | || |||| || || || || ||||| | |||||||| ||| | Sbjct 21336 GTGAGTTT--ACTGACAGTCGGGTCGGCAATGTGAATATTTAGTGATTGACTCTGACAAA 21279 Query 78866 TGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAG 78925 || | ||||| | || |||||||| | | |||| |||||| |||||||||| | Sbjct 21278 TGTACGCTCCTCGATCGGCAGCCATGTCCAAAATCGCCTTTTGCTTGATTTCCCAAACTG 21219 Query 78926 TTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCAT 78982 |||| || | || | || |||| | | |||| || | ||| || | || Sbjct 21218 TTTTGTACTTTTCTTTCACATGAGAAGGAATTTCAGCGATATTTTGTACGGAACCGCGAT 21159 Query 78983 CTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTA- 79041 | | || |||| | ||| |||| || || |||| | || |||| Sbjct 21158 CGCGAAGGATTTGATTCCGAACGTCTGATGTCCACAAATTCATCTCAAT--AAGCTCTTC 21101 Query 79042 -AGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATT 79100 | ||||| || || | | ||||||||||| | || | ||| || | || || Sbjct 21100 CATGAGATATTTGTTGACAATTGTAAATTCTCCAGCGAGGACGCGTCGATTGAACATGTT 21041 Query 79101 ACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGG 79160 || | || || | || || ||| || | ||||||||| ||||| || ||||| Sbjct 21040 GGAAGTGAACGGCTCGATAGACTCGCAATTGCCGAGAATTTGAGCCGTTGAGGCGGTTGG 20981 Query 79161 CATAGGTGCCACCAATAAACTATTTCTAAGACCGTATG-ATCTGATTTTATCTTTTAGAG 79219 ||| || || | || ||| |||| | |||| | | || | || ||||| | Sbjct 20980 CATCGGAGCGAGCAGCAAAGAGTTTCGGATTCCGTGAGTAGCT-ACTTGCTCTTTCAACT 20922 Query 79220 ATTCCCAATCCCAAAGATCAGA--CGGGACA-ACATTCCAAAGATCATATTGTAGAATAC 79276 | ||||||||| || | || ||||| || | ||| | |||| |||| | |||| Sbjct 20921 GCTTCCAATCCCATCGACCGGAATCGGGAATGACCTGCCACATATCAAATTGAAAGATAC 20862 Query 79277 CGTTACTAGCGTATGATCCTGTGTATGTTTCATAAGGTCC---TTCCTTTTCGGCTAATT 79333 | |||| | |||||| | || | || || ||||| |||| | || |||| Sbjct 20861 CTCGACTAACTGGTGATCCAGCATAGCTCTCGTACGGTCCGAGTTCCCGT---GCCAATT 20805 Query 79334 CACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTT 79393 | || || | || || |||| || ||||| ||||| | || ||||| || Sbjct 20804 CCATGGAAGCTTCCATCGCCGCGAAATACATCGTTTCAAAAATTTCTTTGTTGAGCTCGC 20745 Query 79394 GTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAA 79453 | || || ||| ||||||||| | | | || | ||||| || || | ||||||| Sbjct 20744 GAGCAGCTTTGCTTTCAAATGGAAGACTCATCAGTAAAAACGTATCGGCAAGACCTTGAA 20685 Query 79454 CACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAAT 79513 | || || || || |||| ||||| || ||| | || ||||| ||||| ||||||| Sbjct 20684 CGCCGATTCCAATCGGTCGATGTCGCTGATTGCTCACTTGTGCTTCAGGAATCGGATAAT 20625 Query 79514 AATTAATATCTATAATTTTATTGAGATT---CCTGACTATTACTTTGACCACATCCTTTA 79570 |||| | ||| || ||||| |||||||| | | || ||| | ||| || | || Sbjct 20624 AATTGAGATCAATGATTTTGTTGAGATTTTTCGTAACGATTTTTGTGATT---TCGTATA 20568 Query 79571 GTTTGAGAAAATCAAATCGTCCATCTATTACAAACATGTT--CAACGCGACAGATGCCAG 79628 ||| ||| | |||| || ||| |||| | || || ||| |||| || |||| Sbjct 20567 ATTTTGCAAACTGAAAT--TCTTTCTGATACACAAATTTTGACAATGCGATGGAAGCCAA 20510 Query 79629 ATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACT 79688 ||| || || || || || || | || | || | || |||||| |||||| || || Sbjct 20509 ATTGCATACTGCCACTTCTTTGGAGTCTGAGTACTCGATGATTTCACAGCAGAGATTGCT 20450 Query 79689 ACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAG 79748 | ||||||||| | ||| || ||||| || ||||| || || || ||||| Sbjct 20449 TGATCGAATGGTTCCAAGATTCTGCTGATTGGATTTACGATTACAAGCGTCTTTGTAAAG 20390 Query 79749 AATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACT-CGAG 79807 || |||| || || || ||||||||| || | ||| || ||| | | | | | Sbjct 20389 CATATACGGCGTTCCGGTCTCAATCTGACTATCCAAAATGGCAAACCACA--ATTGCTGG 20332 Query 79808 CCTTTATTATAGACTT---GTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGA 79864 |||| | || ||| | | |||| ||||| | | |||||| || | Sbjct 20331 GCTTTG--ACAGTCTTTCGGGCAATGTTTTGAGACTCGTACTTTTCATATAACGCATCAA 20274 Query 79865 ACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACT 79924 | ||| |||||| || | | || ||| |||| ||||| | || ||| | Sbjct 20273 ATTCGCTTCCCCATGTCTCATAAAGTCGTGGAGCCTCGTTCGGACAGAATAAACTCCATT 20214 Query 79925 CTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGAT 79984 || | || | || ||||||||||| ||||| || ||||||||||| ||||| || Sbjct 20213 CTTGGTTGTCTTCCACACGTTTCATAAACAGATCGGGGATCCAAAGAGCATAAAATAAAT 20154 Query 79985 CTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATAT 80044 ||| | || ||| || ||||| |||||| || || || ||| | | |||| Sbjct 20153 CTCGTGCTCGATGGAGTTCATTTCCATGATTCTTACGTAGTTCCAGAAACTCAAAGATAT 20094 Query 80045 CAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTC-GTTTGTTTCCTCCCTGA 80103 | | |||||| || || | || || || | || ||| || | || || || ||| Sbjct 20093 CCGCATGCCAGGGCTCTAGATAAATTGCAA-AAGACCCTTTCCGCTTCCCACCACCTTGA 20035 Query 80104 TCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTA 80163 || | ||||| ||| |||| ||| | || | | |||||||| ||| ||||| || | Sbjct 20034 TCAACGTATCGAGCTGTGTCATTGAACACCCGAAGCATTGGAACAATTCCATTCGAACTT 19975 Query 80164 CCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATT 80223 ||||| |||||| ||||| || ||| |||||||| ||| | || || Sbjct 19974 CCATTCGTCCCGCGAATATAACTGTTGGTGGAGCGAATATTGGAAATACTGACGCCAATA 19915 Query 80224 CCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATG 80283 || || ||| || || || | || ||| |||| | ||| || || ||||| || || Sbjct 19914 CCGCCAGCCCACTTTGAAATACACGCACATTGTTTCAGCGTGTCGTAAATGCCGTCGATA 19855 Query 80284 CTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCA 80343 |||||| |||| | ||||||||| || | |||| | ||| ||||||||| Sbjct 19854 GAATCATCTTGCATGGATAATAGAAAACACGACGATAATTGGGGTCGAGGCGTTCCCGCA 19795 Query 80344 TTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCA 80403 || || | || |||| || |||||||| | |||| |||| | | ||||| || Sbjct 19794 TTGAAAAGCGTCGGAGTTGCATGCGTAAAGAACTTTTGTGACATGTGTTCATACGTTTCC 19735 Query 80404 ATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGA 80463 | | | | || | || | || || || || || || || ||||||| ||| || || Sbjct 19734 AAAACGGCATCCAAATTCTCTTTGTGTATGCCGACAGCCACTCGCATTATCATATGTTGT 19675 Query 80464 GGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAA 80523 || | |||| | || ||| | ||||| || ||||| |||| ||||||||| Sbjct 19674 GGGCGTTCACACACTTTTCCATTCACACGCAACAGATACGATTTCTCCAGAGTTTTAAAG 19615 Query 80524 CCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTA 80583 |||||||||| ||| |||||||| || ||||| | || ||||| || || Sbjct 19614 CCAAAATAGTCGTAATCAAAGTCTCTATCACCGATAATGGCGGAATTGAGAGCTTCTTTG 19555 Query 80584 TATTTGTTAACTACATCCATGGTGATACTTG--AAATAATCGGAGAATG---TTTCCCAT 80638 | | |||| | || ||| || ||| | |||| |||| | ||| Sbjct 19554 TTCTCCATAAC-AATTCGATGCACATCGTTGGCGATTAAT-GGAGCGGGTACTTTGGTGG 19497 Query 80639 TTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTT 80698 ||| | ||| | || ||||| | || |||||| || | ||| ||||| | Sbjct 19496 TTTCGTGCTTATTTTCGTAAAATAA---TTGAATGTTTTCACTGAAGACTTTGTTTGTAT 19440 Query 80699 CCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATGTTGTG 80758 || |||| ||| || | || |||| || || || ||| |||| |||||||||| Sbjct 19439 TTTTATGTAAATTGGAAATAGCAATTCGAGCAGCCAATTTGGAGAAATCGGGATGTTGTG 19380 Query 80759 TAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCAT 80818 | | || ||||| |||| ||||||| ||||||||| || || || || Sbjct 19379 TGCTGCAGTAAGCTGCGGTTTCTGCTGCCAATTCGTCCAATTCCGATGTGGTGACGCCCG 19320 Query 80819 TATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTA 80878 ||| | || || || ||| || ||||| | ||||| | | || ||||||| Sbjct 19319 GATACACGCCAGCAATCACTTTCTGAGATATTTGGACGGGATCAACGTATTCTGTGTTTA 19260 Query 80879 AGCCATAACATAATTTTCTAATACGAGACGTGATTTTATCAAACATGACATTTTCCTTGT 80938 || || || | |||| | || || | |||||||| || || |||| ||| || Sbjct 19259 AGTTGTAGCAGAGTTTTGTGATTCGCGCAGTGATTTTGTCGAATTTGACGACTTCTTTTC 19200 Query 80939 ATCCATTTCGTTTAATGACAAACATTTT 80966 ||| | ||||| |||||| ||||||| Sbjct 19199 GTCCGTCACGTTTGATGACATACATTTT 19172 >seq3629 Length=149247 Score = 237 bits (262), Expect = 2e-57 Identities = 594/892 (67%), Gaps = 23/892 (3%) Strand=Plus/Plus Query 49675 TATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCATG 49734 ||||| || || ||||| || ||||| || |||||||||| || || || | ||||| Sbjct 30653 TATTCTCCAACGCGTTTCTCAAAAAAGTTTGTTTTTCCTTGCAGAGAAATCATATCCATC 30712 Query 49735 AAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTA 49794 | ||||| ||||| | | | | ||| | || | | || | | || | ||||| | Sbjct 30713 CAGTCAAAGGGATTAGAAGCGTGATATAACTTGCTGACGCCAAGTGCATGTAACAATCGA 30772 Query 49795 TCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACT 49854 ||||| ||||| || || ||| ||||| |||||||||| || || | ||| Sbjct 30773 TCCGCCACAAACTCGATGTATTGACCCATCAAACTTGAATTCATTCCAATTAGCTCGACT 30832 Query 49855 GGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATCTA 49914 ||||| | | | |||||||||||| ||| || || || | || || | | Sbjct 30833 GGAAGTGAATCTCGTACAAATTCTTGTTCGATGATAACGGCGTCGGAAATGATTGCATGA 30892 Query 49915 ACGGTTTCTTCACTCGGTGGATGCAA---TAAATGTTTAAA---CATCAAACATGCGAAA 49968 | | |||| |||| || || |||| | ||||| |||||| || Sbjct 30893 ATAGAGCCTTC------TGGAAGCTTATTTACCAGTTTCGAGTACATCAGACATGCAAAG 30946 Query 49969 TCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATT 50028 || || || || || || || | ||| || || || || ||||| ||||| ||||| Sbjct 30947 TCACAATGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCAGGCATC 31006 Query 50029 AGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGACCCAGAAAAGAAGATTCCTTC 50087 | || || || || ||||||||||| || ||| ||||| || || || ||||||||||| Sbjct 31007 AATCCTCGTTTCTTCAGCCAAAATATAGA-GCAGAATGATCCGGAGAAAAAGATTCCTTC 31065 Query 50088 TACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCATGTATC-CACT-TT 50145 || || |||||||| || | ||| ||| || | ||| | || ||| ||| || Sbjct 31066 GACGGCCGCAAAGGCTACCACTCTTTCTGCAAACGAGGCATACTT-TGGATCGCACCATT 31124 Query 50146 TGA--GCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 50203 | | ||||| | || || || | || || || || ||||| || || | | || Sbjct 31125 TCAACGCCCATTGTGCTTTATTGGTAACGCACGGGATTGTTTCAATCGCGCATAGTAAAT 31184 Query 50204 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 50263 | |||||| | |||||| | || ||||| ||||| | ||||| |||||| | Sbjct 31185 GCTGTTTTTCGGTTGGATCTTTGATGTATGTATCAATCAATAACGAATACACTTCCGAGT 31244 Query 50264 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTT 50323 | || ||||| || || || || ||||| || || |||| ||| || | || || || | Sbjct 31245 GTATATTTTCTATTGCAATTTGGAATCCATAAAAGCATCGAGCTTCCGGGATTTGAACCT 31304 Query 50324 CTGTACAAAATCGTTCA--GCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 50381 | | | || |||| || | ||||||||| || || || |||||||||||||| || Sbjct 31305 CACTGCTGAAA--TTCATGGCGAGATTTTCATTAACAATCCCATCACTGGCTGCAAAGAA 31362 Query 50382 CGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTGAT 50441 ||||| || ||||| ||||| ||| | || ||| | || ||| ||| ||||| || Sbjct 31363 GGCCAACACGTGTTTGATAAAGTGTCTCTCATTGTCCGATATATTAAGCCAGTCATTCAT 31422 Query 50442 ATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACAT 50501 || | | ||| | |||||| | |||||||| ||||||||| || |||||||| Sbjct 31423 GTCATGCACCAAATCGATTTCTTCTGCGGTCCAAAAGCTTGCCTCTGCTTTCTTATACAT 31482 Query 50502 ATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGATTT 50553 | ||| || ||| | ||| || || || | ||||| | || |||||| Sbjct 31483 GTCCCAAATCTCAGATTGTTGTATCGGAAATAAGACAAAGCGGTTCGGATTT 31534 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718235176041800