Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq25 91.5 9e-14 >seq25 Length=104834 Score = 91.5 bits (100), Expect = 9e-14 Identities = 151/214 (71%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 33160 CACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATC 33219 ||||| ||| | || |||||||| || || |||||||| | | | || ||| || Sbjct 77984 CACCAGATGAAGCGTAGACTCTTTCTGAATGTTGTAATCCGCAAGCGTTCGTCCGTCTTC 78043 Query 33220 CAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTC--- 33276 || ||| || || ||| |||| |||||||||||| | || || |||||||| || Sbjct 78044 CAGTTGTTTACCGGCAAAAATTAGACGTTGCTGGTCTGGAGGAATTCCTTCTTTGTCCTG 78103 Query 33277 GCTAATCGCCTGTTTTACTGTTTGAATCGTGTC-GTTGGGTTGAACGTCCAGAGTTATCG 33335 | | ||||| || || | | ||| ||||| | || | | || ||||||||||| | Sbjct 78104 GATCTTCGCC---TTCACATTGTCAATAGTGTCAGATGACTCG-ACTTCCAGAGTTATAG 78159 Query 33336 TTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 |||| || || || || || || ||||||||||| Sbjct 78160 TTTTCCCGGTCAGCGTCTTAACAAAAATTTGCAT 78193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318763050293010