Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq25 93.3 4e-14 >seq25 Length=104834 Score = 93.3 bits (102), Expect = 4e-14 Identities = 147/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 19999 CACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTC 20058 |||||| || | || |||||||| || ||||||||||| | | ||| ||||| Sbjct 78212 CACCAAGTGCAACGTTGATTCTTTCTGGATGTTGTAATCCGCAAGCGTTCGTCCGTCTTC 78271 Query 20059 CAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGC 20118 || |||||| || ||| |||| || | || || || || | ||||||||||| Sbjct 78272 CAGTTGTTTACCGGCAAAAATTAGACGTTGCTGGTCTGGAGGAATTCCTTCTTTGTCCTG 78331 Query 20119 AATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTT 20178 || || ||||| | | | | || ||| || |||| ||||| ||||| ||||| Sbjct 78332 GATCTTCGCCTTCACATTGTCGATAGTATCTGAAGATTCCACTTCCAACGTAATAGTTTT 78391 Query 20179 GCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 || |||| ||| || ||||||||||||||| Sbjct 78392 CCCAGTCAGCGTCTTAACAAAAATTTGCATT 78422 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 19999 CACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTC 20058 ||||| ||| || ||||| ||||| || ||||||||||| | | ||| ||||| Sbjct 77984 CACCAGATGAAGCGTAGACTCTTTCTGAATGTTGTAATCCGCAAGCGTTCGTCCGTCTTC 78043 Query 20059 CAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGC 20118 || |||||| || ||| |||| || | || || || || | ||||||||||| Sbjct 78044 CAGTTGTTTACCGGCAAAAATTAGACGTTGCTGGTCTGGAGGAATTCCTTCTTTGTCCTG 78103 Query 20119 AATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTT 20178 || || ||||| | | ||| || || | || ||||| || || ||||| Sbjct 78104 GATCTTCGCCTTCACATTGTCAATAGTGTCAGATGACTCGACTTCCAGAGTTATAGTTTT 78163 Query 20179 GCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 ||||||| ||| || ||||||||||||||| Sbjct 78164 CCCGGTCAGCGTCTTAACAAAAATTTGCATT 78194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419568049122345