Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq655 87.8 2e-12 seq25 82.4 6e-11 >seq655 Length=45005 Score = 87.8 bits (96), Expect = 2e-12 Identities = 132/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 48539 TTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATT 48598 ||||| ||||||||||| || | ||| ||||||||| || || || || |||| Sbjct 27417 TTTTGGATGTTGTAATCCGCGAGCGTTCGGCCGTCCTCCAATTGTTTTCCTGCGAAAATC 27476 Query 48599 AAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCT 48658 |||||||| || || || | | ||||||||| ||| ||| ||| | | | Sbjct 27477 AAACGCTGTTGGTCGGGAGGAATTCCTTCCTTGTCTTGAATCTTCGCCTTCACATTATCG 27536 Query 48659 ATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAA 48718 ||||| |||| || || ||| | || || ||||| |||||||| ||||| || ||| Sbjct 27537 ATGGTGTCGGATGATTCGACCTCAAGAGTGATTGTTTTCCCGGTGAGTGTTTTGACGAAA 27596 Query 48719 ATCTGCAT 48726 |||||||| Sbjct 27597 ATCTGCAT 27604 >seq25 Length=104834 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576 ||| | |||||| || ||| || |||||||||||||| || | ||| |||| || Sbjct 77984 CACCAGATGAAGCGTAGACTCTTTCTGAATGTTGTAATCCGCAAGCGTTCGTCCGTCTTC 78043 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 ||| || |||||| | |||||| ||| ||||| || || | | ||| |||||| Sbjct 78044 CAGTTGTTTACCGGCAAAAATTAGACGTTGCTGGTCTGGAGGAATTCCTTCTTTGTCCTG 78103 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 || ||| ||| | | | || || || | ||||| || | ||||| ||||| Sbjct 78104 GATCTTCGCCTTCACATTGTCAATAGTGTCAGATGACTCGACTTCCAGAGTTATAGTTTT 78163 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||||| || || || |||||||| ||||| Sbjct 78164 CCCGGTCAGCGTCTTAACAAAAATTTGCAT 78193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421231973173745