Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq3502 93.3 5e-14 >seq3502 Length=87171 Score = 93.3 bits (102), Expect = 5e-14 Identities = 267/406 (66%), Gaps = 10/406 (2%) Strand=Plus/Minus Query 6841 TAAATATGAGCATCTCCTAGCGTATGAATAAATTCACCTGGTTTCATATCAACAGCTTGA 6900 || ||||| |||||||| | | ||||| ||| || || |||| | |||| | || Sbjct 15294 TAGATATGGGCATCTCCGATCACATGAACAAACTCGCCGGGTTGGAGATCAGTCACGTGT 15235 Query 6901 GCAATTAAATATGTTAATAATGCATAAGAAGCTACATTAAAAGGTACACCTAATCCCATA 6960 ||||| | | ||| || | || || ||| | ||| || || || || | || ||| Sbjct 15234 GCAATCATTTTTGTCAAAAGCGCGTAGCTAGCAATATTGAATGGAACGCCCAGACCAATA 15175 Query 6961 TCTGCTGATCTTTGATAACATTGACAAGATAAAATATTGTCTATA-GCA---TAAAATTG 7016 || || |||| || || ||| || ||||| || | || ||| |||||||| Sbjct 15174 TCAGCGGATCGCTGGTACATTTGGCATGATAA----TTCCCCATTTGCAACGTAAAATTG 15119 Query 7017 ACACAATACATGACATGGAGGTAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGT 7076 |||| | |||||| |||||||| | | ||| ||| | |||||||||||| | Sbjct 15118 GCACATGAGATGACAGGGAGGTAATGCCATTTCGGCTAAATCGGTTGGATTCCAAGCGGA 15059 Query 7077 CATTAAAATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATAATTATTTG-TAATT 7135 | | ||||||| | |||| | | ||||| | ||| ||| | || | | || Sbjct 15058 TAAGATGATACGTCGACAATTTTGGTCAGTTTTGAGTTTGTGTATCA-CATCGGCGAGTT 15000 Query 7136 GATCTATACCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTC 7195 |||| | ||||| || |||| | ||| || | | ||| | || || ||||| | Sbjct 14999 GATCAAAGCCCTGGCCGCTGTAATCCGCATGCATATCTGTGTAACTTGCACCGAAATGAC 14940 Query 7196 TCCATTGAAACCCATAAATAGGACCTAAATCACCTTCTTCACGATG 7241 ||||||||| || || || || |||||||| |||||| ||||| Sbjct 14939 GCCATTGAAAGCCGTAGATTGGTCCTAAATCGCCTTCTATGCGATG 14894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595844105742000