Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq564 149 1e-31 seq2262 129 9e-26 >seq564 Length=147435 Score = 149 bits (164), Expect = 1e-31 Identities = 199/276 (72%), Gaps = 3/276 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||||||||| | | |||||| || |||||||||||||||||||| ||||| || Sbjct 88088 GCAAAGCGTCATCGTAAAGTTCTTCGTGACAACATCCAAGGAATCACCAAACCAGCCATT 88147 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||||| ||||||||||| || || || ||| || || | |||| ||||| | Sbjct 88148 CGTCGTCTTGCTCGTCGTGGAGGTGTTAAACGTATCAGCGGTCTTATCTACGAAGAAACA 88207 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | |||| | || | ||| | | | ||||| | ||| | | || || ||| Sbjct 88208 CGAGGTGTTCTCAAAGTGTTCTTGGAAAATGTTATTCGCGATTCCGTAACTTACACAGAG 88267 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 |||||| | |||||||| || | |||||| | ||||| ||| | ||||||||||| Sbjct 88268 CACGCTCGTAGAAAGACTGTAACAGCAATGGATGTGGTCTACGCACTTAAACGTCAAGGA 88327 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTA---ATCTTCT 16705 |||| | |||||||| || |||| ||||||| Sbjct 88328 CGTACACTATATGGTTTCGGTGGTTAGATATCTTCT 88363 >seq2262 Length=69440 Score = 129 bits (142), Expect = 9e-26 Identities = 185/261 (71%), Gaps = 0/261 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| || |||||||| | | || || |||||||||||||| ||||| ||||| ||||| Sbjct 13339 CGCCAAACGTCATCGTAAAGTACTGCGCGATAACATCCAAGGTATCACAAAGCCCGCTAT 13398 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||||||| ||||||||||| || || ||||| || || || |||| ||||| | Sbjct 13399 CCGTCGTCTTGCTCGTCGTGGAGGTGTAAAGCGAATCAGCGGTCTGATCTACGAAGAAAC 13458 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| ||| | || | || || | | || |||| ||| | | || ||||| Sbjct 13459 ACGTGGAGTTCTCAAAGTATTTCTTGAAAATGTCATCCGTGACTCAGTAACATACACCGA 13518 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||| || | || || || || | |||||| |||| ||||| ||||||||||||| Sbjct 13519 GCATGCGCGCAGAAAAACAGTGACAGCAATGGATGTCGTATATGCTCTGAAACGTCAAGG 13578 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 | | | | || |||||||| Sbjct 13579 CAGAACCCTCTACGGTTTTGG 13599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79071775920285