Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq655 84.2 2e-11 seq25 82.4 7e-11 >seq655 Length=45005 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | || || |||||| | || || ||| | || || | || ||||| | Sbjct 27605 AATGCAGATTTTCGTCAAAACACTCACCGGGAAAACAATCACTCTTGAGGTCGAATCATC 27546 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||||||||||| | || || |||||| ||||| ||||| || |||||||| || Sbjct 27545 CGACACCATCGATAATGTGAAGGCGAAGATTCAAGACAAGGAAGGAATTCCTCCCGACCA 27486 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 |||| | |||||| || || || ||| | || || | | ||| || ||||| || Sbjct 27485 ACAGCGTTTGATTTTCGCAGGAAAACAATTGGAGGACGGCCGAACGCTCGCGGATTACAA 27426 Query 24170 CATTCAAAAAG 24180 ||| ||||||| Sbjct 27425 CATCCAAAAAG 27415 >seq25 Length=104834 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/212 (69%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | ||||| || || | || || ||| | || || | ||||||||| | Sbjct 78194 AATGCAAATTTTTGTTAAGACGCTGACCGGGAAAACTATAACTCTGGAAGTCGAGTCATC 78135 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||| || || | || || ||||| ||||||||||| || ||||| || || Sbjct 78134 TGACACTATTGACAATGTGAAGGCGAAGATCCAGGACAAAGAAGGAATTCCTCCAGACCA 78075 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATA 24168 || | || |||| | ||| || ||||| ||||| | | |||| || ||||| | Sbjct 78074 GCAACGTCTAATTTTTGCCGGTAAACAACTGGAAGACG-GACGAACGCTTGCGGATTACA 78016 Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTG 24200 ||||||| ||||| ||||| ||||| | ||| Sbjct 78015 ACATTCAGAAAGAGTCTACGCTTCATCTGGTG 77984 Score = 82.4 bits (90), Expect = 7e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| ||||| | |||||||| | || || | ||||| ||| | Sbjct 78649 ATGCAGATTTTTGTGAAAACGCTTACTGGAAAGACCATCACTTTGGAAGTTGAGTCTTCA 78590 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | || || |||||| ||||||||||| || ||||| ||||| Sbjct 78589 GACACGATCGATAATGTAAAGGCCAAGATTCAAGACAAAGAAGGAATTCCTCCTGATCAG 78530 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGA-TGACAGAAACGTCAGCGATTATAA 24169 || | ||||| | || || || ||||| ||||| ||| | | | | ||||| || Sbjct 78529 CAACGTCTGATCTTCGCTGGAAAACAACTAGAAGACGGACGTACTCTTGCG-GATTACAA 78471 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTA 24203 ||| || |||||||| || | || || ||| || Sbjct 78470 CATCCAGAAAGAATCAACGTTGCACTTGGTGCTA 78437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429916376780475