Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq25 111 1e-19 seq655 96.9 3e-15 >seq25 Length=104834 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| | ||| | || ||||| || |||||||||||||| | | Sbjct 77967 CCACCACGAAGACGAAGCACCAGATGAAGCGTAGACTCTTTCTGAATGTTGTAATC-CGC 78025 Query 131068 ATG-GTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | | || || ||| || || || || || || | |||| ||| |||||||| ||||| Sbjct 78026 AAGCGTTCGTCCGTCTTCCAGTTGTTTACCGGCAAAAATTAGACGTTGCTGGTCTGGAGG 78085 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 |||||||||||||| ||| ||| ||| | | || | ||| || | ||||||| Sbjct 78086 AATTCCTTCTTTGTCCTGGATCTTCGCCTTCACATTGTCAATAGTGTCAGATGACTCGAC 78145 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||||| ||||| || || || || ||||| ||||| Sbjct 78146 TTCCAGAGTTATAGTTTTCCCGGTCAGCGTCTTAACAAAAATTTGCAT 78193 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| || || | || || || || || ||||||||||| | | Sbjct 78195 CCACCACGAAGACGTAGCACCAAGTGCAACGTTGATTCTTTCTGGATGTTGTAATC-CGC 78253 Query 131068 ATG-GTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | | || || ||| || || || || || || | |||| ||| |||||||| ||||| Sbjct 78254 AAGCGTTCGTCCGTCTTCCAGTTGTTTACCGGCAAAAATTAGACGTTGCTGGTCTGGAGG 78313 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 |||||||||||||| ||| ||| ||| | | || | |||||| | || || | Sbjct 78314 AATTCCTTCTTTGTCCTGGATCTTCGCCTTCACATTGTCGATAGTATCTGAAGATTCCAC 78373 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| ||||| || || || || || || ||||| ||||| Sbjct 78374 TTCCAACGTAATAGTTTTCCCAGTCAGCGTCTTAACAAAAATTTGCAT 78421 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| || || | || || || || || ||||||||||| | | Sbjct 78423 CCACCACGAAGACGTAGCACCAAGTGCAACGTTGATTCTTTCTGGATGTTGTAATC-CGC 78481 Query 131068 ATG-GTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | | || || ||| ||||| || || || ||| |||| | ||| ||||| || ||||| Sbjct 78482 AAGAGTACGTCCGTCTTCTAGTTGTTTTCCAGCGAAGATCAGACGTTGCTGATCAGGAGG 78541 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 |||||||||||||| || || ||| | | || | || || | ||||| | Sbjct 78542 AATTCCTTCTTTGTCTTGAATCTTGGCCTTTACATTATCGATCGTGTCTGAAGACTCAAC 78601 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | || | ||| || || || || ||||| || |||||||||||| Sbjct 78602 TTCCAAAGTGATGGTCTTTCCAGTAAGCGTTTTCACAAAAATCTGCATG 78650 >seq655 Length=45005 Score = 96.9 bits (106), Expect = 3e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 131047 TTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATT 131106 ||||| ||||||||||| | || || |||||| | || || |||||| | || Sbjct 27417 TTTTGGATGTTGTAATCCGCGAGCGTTCGGCCGTCCTCCAATTGTTTTCCTGCGAAAATC 27476 Query 131107 AAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCC 131166 |||||||| ||||| ||||| |||||||| ||||| || ||| ||| | | || Sbjct 27477 AAACGCTGTTGGTCGGGAGGAATTCCTTCCTTGTCTTGAATCTTCGCCTTCACATTATCG 27536 Query 131167 ACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAA 131226 | || |||| || |||| || | || | ||||| ||||| || ||||| |||||| Sbjct 27537 ATGGTGTCGGATGATTCGACCTCAAGAGTGATTGTTTTCCCGGTGAGTGTTTTGACGAAA 27596 Query 131227 ATCTGCAT 131234 |||||||| Sbjct 27597 ATCTGCAT 27604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471990703900800