Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq25 109 4e-19 seq655 93.3 3e-14 >seq25 Length=104834 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||| ||||| ||||| || || |||||||| || || | ||| |||| Sbjct 77982 AGCACCAGATGAAGCGTAGACTCTTTCTGAATGTTGTAATCCGCAAGCGTTCGTCCGTCT 78041 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 |||| |||||| || ||| |||| || || || ||||| ||| | || |||||||| Sbjct 78042 TCCAGTTGTTTACCGGCAAAAATTAGACGTTGCTGGTCTGGAGGAATTCCTTCTTTGTCC 78101 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 || | | |||||| | | | | |||||| | ||| ||||| || || ||| Sbjct 78102 TGGATCTTCGCCTTCACATTGTCAATAGTGTCAGATGACTCGACTTCCAGAGTTATAGTT 78161 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 || ||||||||||| || |||||||| |||||| Sbjct 78162 TTCCCGGTCAGCGTCTTAACAAAAATTTGCATT 78194 >seq655 Length=45005 Score = 93.3 bits (102), Expect = 3e-14 Identities = 134/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 16748 TTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATA 16807 ||||| |||||||| || || | ||| | |||||||||||||||| || || |||| Sbjct 27417 TTTTGGATGTTGTAATCCGCGAGCGTTCGGCCGTCCTCCAATTGTTTTCCTGCGAAAATC 27476 Query 16808 AGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCC 16867 | ||||||||||| ||| | || || ||||| ||| | | |||||| | | Sbjct 27477 AAACGCTGTTGGTCGGGAGGAATTCCTTCCTTGTCTTGAATCTTCGCCTTCACATTATCG 27536 Query 16868 ACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAA 16927 | |||||| | || || | ||||| ||||| ||||| || |||||||| ||| Sbjct 27537 ATGGTGTCGGATGATTCGACCTCAAGAGTGATTGTTTTCCCGGTGAGTGTTTTGACGAAA 27596 Query 16928 ATCTGCATT 16936 ||||||||| Sbjct 27597 ATCTGCATT 27605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405069510897550