Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq3629 246 3e-60 >seq3629 Length=149247 Score = 246 bits (272), Expect = 3e-60 Identities = 647/966 (67%), Gaps = 31/966 (3%) Strand=Plus/Plus Query 92741 ATTAGAAATCTGCATCTAGTGTAAATACATTGTCAAGTGGATTCTTATTCAT-AACACCA 92799 |||||||||||||||||| || || || | || || | | || ||||||| Sbjct 30588 ATTAGAAATCTGCATCTAAAGTGAAAACTTGCTCCTTTGCAG----AGACACCAACACCA 30643 Query 92800 CATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCCAAAGATATC 92859 |||| ||||| ||||| ||| ||||| || ||||| ||||||| || ||| ||| Sbjct 30644 GATTTCGCATATTCTCCAACGCGTTTCTCAAAAAAGTTTGTTTTTCCTTGCAGAGAAATC 30703 Query 92860 GAATTCA-CTAGTGATTGG-ATTCTTGGCGTTATAATACTTTTCACCGATCAACT-CGTA 92916 || || | ||| | || ||| |||| ||| |||| || ||| | | | Sbjct 30704 ATATCCATCCAGTCAAAGGGATTAGAAGCGTGATATAACTTGCTGACGC-CAAGTGCATG 30762 Query 92917 CAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAG 92976 || |||| ||| || ||||| || ||||| ||| ||||||| |||||||||| | Sbjct 30763 TAACAATCGATCCGCCACAAACTCGATGTATTGACCCATCAAACTTGAATTCATTCCAAT 30822 Query 92977 AAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAA 93036 || || || || | || | || |||| ||||| | |||||| || | Sbjct 30823 TAGCTCGACTGGAAGTGAATCTCGTACAAATTCTTGTTCGATGATAACGGCGTCGGAAAT 30882 Query 93037 GATTTCTATTACTCTACTATT-TGGTGGTTTTTGTACGACATAATTGTACATTAAGCACG 93095 |||| | || | | | || ||| | || | ||| | | |||||| | || | Sbjct 30883 GATTGC-ATGAATAGAGCCTTCTGGAAGCTTATTTACCAGTTTCGAGTACATCAGACATG 30941 Query 93096 CAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA--CC 93153 ||||||| ||||| ||||| || || || | |||||| |||| ||| || Sbjct 30942 CAAAGTCACAATGTAGTCCTTCATCACGACTGATGAGCTCATT--TGAAAAGCAAAGTCC 30999 Query 93154 TGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTA-CCAGaaaaaaaTA 93212 || | || |||||||||||| ||||||||||| || ||| || | || || ||||| | Sbjct 31000 AGGCATCAATCCTCGTTTCTTCAGCCAAAATATAGA-GCAGAATGATCCGGAGAAAAAGA 31058 Query 93213 TACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGA 93272 | ||||| ||||| ||||| || || | | ||| ||||| | || || ||| || Sbjct 31059 TTCCTTCGACGGCCGCAAAGGCTACCACTCTTTCTGCAAAC---GAGGCAT-ACTTTGGA 31114 Query 93273 TC----CATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCG 93328 || ||||| || ||||| | ||||| || ||| || || | |||||| || ||| Sbjct 31115 TCGCACCATTTCAACGCCCATTGTGCTTTATTGGTAACGCACGGGATTGTTTCAATCGCG 31174 Query 93329 TTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATAC 93388 | || | | | ||| | |||| ||||||||||| || || | |||||| Sbjct 31175 CATAGTAAATGCTGTTTTTCGGTTGGATCTTTGATGTATGTATCAATCAATAACGAATAC 31234 Query 93389 ATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTG 93448 | ||| || || | ||| || ||||||||||||||||| || || |||| |||||||| | Sbjct 31235 ACTTCCGAGTGTATATTTTCTATTGCAATTTGGAATCCATAAAAGCATCGAGCTTCCGGG 31294 Query 93449 ATCTGCACTTC-TTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGC 93507 || || || || || |||| || ||||||||||||| || || ||||| || Sbjct 31295 ATTTGAACCTCACTGCTGAAAT-TCATGGCGAGATTTTCATTAACAATCCCATCACTGGC 31353 Query 93508 TGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATCCCA 93567 |||||| || ||||| | || || ||||| ||| |||||| || | ||| ||| Sbjct 31354 TGCAAAGAAGGCCAACACGTGTTTGATAAAGTGTCTCTCATTGTCCGATATATTAAGCCA 31413 Query 93568 ATCGGATAGATCTTTTGAA--AGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCT 93625 || || || | || | | ||||| |||||| | |||||||| ||| |||||| Sbjct 31414 GTC--ATTCATGTCATGCACCAAATCGATTTCTTCTGCGGTCCAAAAGCTTGCCTCTGCT 31471 Query 93626 TTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGG 93685 || || ||||| ||||| || || | ||| || ||||||| |||||| || || || Sbjct 31472 TTCTTATACATGTCCCAAATCTCAGATTGTTGTATCGGAAATAAGACAAAGCGGTTCGGA 31531 Query 93686 TTATCT 93691 || ||| Sbjct 31532 TTTTCT 31537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556834731953800