Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq3629 118 2e-21 >seq3629 Length=149247 Score = 118 bits (130), Expect = 2e-21 Identities = 305/462 (66%), Gaps = 12/462 (3%) Strand=Plus/Minus Query 42412 TCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCA 42471 ||||| || | |||||||||| || ||| ||| || || || ||||| || || |||| Sbjct 31379 TCAAACACGTGTTGGCCTTCTTTGCAGCCAGTGATGGGATTGTTAATGAAAATCTCGCCA 31320 Query 42472 CCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAG 42531 | |||| | ||||| || | || || || ||||| || || ||||| || | Sbjct 31319 TGAATTTCAGCAGTGAGGTTCAAATCCCGGAAGCTCGATGCTTTTATGGATTCCAAATTG 31260 Query 42532 CCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATC 42591 | ||||| || | ||||| || ||||| | | || | | || |||||| |||| Sbjct 31259 CAATAGAAAATATACACTCGGAAGTGTATTCGTTATTGATTGATACATACATCAAAGATC 31200 Query 42592 CCGTCGAGCGTAACGGGCTGTTCAAGGCC--ATGGAGACGATGCCCTGCATCAAGAAGAA 42649 | ||| ||| | | | | | || || || || || || ||| | | || || Sbjct 31199 CAACCGAAA--AACAGCATTTACTATGCGCGATTGAAACAATCCCGTGCGTTACCAATAA 31142 Query 42650 GGCGGACTGGGCGCTCAACTGG----ATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGC 42705 || | |||||| | || ||| ||| | ||| | || |||| | || || Sbjct 31141 AGCACAATGGGCGTTGAAATGGTGCGATCCAAAGT----ATGCCTCGTTTGCAGAAAGAG 31086 Query 42706 TGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCT 42765 ||||||||||| | |||||||| || ||||| ||||| || | ||| ||| || || | Sbjct 31085 TGGTAGCCTTTGCGGCCGTCGAAGGAATCTTTTTCTCCGGATCATTCTGCTCTATATTTT 31026 Query 42766 GGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGG 42825 |||| ||| | | | |||||| ||||| ||| || || || |||||||| | | Sbjct 31025 GGCTGAAGAAACGAGGATTGATGCCTGGACTTTGCTTTTCAAATGAGCTCATCAGTCGTG 30966 Query 42826 ACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGA 42867 | || || || ||| | |||||||| || || ||| ||||| Sbjct 30965 ATGAAGGACTACATTGTGACTTTGCATGTCTGATGTACTCGA 30924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944294993121200