Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq3502 109 5e-19 >seq3502 Length=87171 Score = 109 bits (120), Expect = 5e-19 Identities = 182/263 (69%), Gaps = 0/263 (0%) Strand=Plus/Minus Query 20135 GGAAAGGGACGTGGAGTGCGCGTCAGCTGCAGCCGTAGTGGCTCTATATGCGTTTTGTAG 20194 ||||| || ||||||||||| || || | |||| || || | || | ||||| Sbjct 15351 GGAAACGGGCGTGGAGTGCGTTCAAGTTGTGCCTGTAGCGGTTCCAAGTGATTCATGTAG 15292 Query 20195 ATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGAGCA 20254 || ||||||||||| | | |||| |||||| |||||| ||| |||| || || ||| Sbjct 15291 ATATGGGCATCTCCGATCACATGAACAAACTCGCCGGGTTGGAGATCAGTCACGTGTGCA 15232 Query 20255 AGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCT 20314 | ||| | || || || | ||||| ||||| || || ||||| |||| ||| || || Sbjct 15231 ATCATTTTTGTCAAAAGCGCGTAGCTAGCAATATTGAATGGAACGCCCAGACCAATATCA 15172 Query 20315 CCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGACATAAC 20374 | || | ||| |||| || || || | || || | || || |||||||| || | Sbjct 15171 GCGGATCGCTGGTACATTTGGCATGATAATTCCCCATTTGCAACGTAAAATTGGCACATG 15112 Query 20375 AAGTGACAGGGCGGAAGCGCCAT 20397 | |||||||| || | ||||| Sbjct 15111 AGATGACAGGGAGGTAATGCCAT 15089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441352138235800