Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq25 100 2e-16 seq821 86.0 5e-12 >seq25 Length=104834 Score = 100 bits (110), Expect = 2e-16 Identities = 156/222 (70%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 || || ||||||||||||||||| ||| ||||||||||||||||| || | ||| Sbjct 77976 AGACGAAGCACCAGATGAAGCGTAGACTCTTTCTGAATGTTGTAATCCGCAAGCGTTCGT 78035 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029 |||| |||| ||| || |||||||| || || || ||||| || || | | ||| Sbjct 78036 CCGTCTTCCAGTTGTTTACCGGCAAAAATTAGACGTTGCTGGTCTGGAGGAATTCCTTCT 78095 Query 34030 TTGTCCATAATTTTTTGCTT---AATGGAACTCACACTATCAGTAGATTCGCATTCGACC 34086 |||||| || || ||| | || | | | | |||| || ||| ||| | Sbjct 78096 TTGTCCTGGATCTTCGCCTTCACATTGTCA---ATAGTGTCAGATGACTCGACTTCCAGA 78152 Query 34087 GTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128 ||||| ||||| ||||| || || || ||||| ||||||||| Sbjct 78153 GTTATAGTTTTCCCGGTCAGCGTCTTAACAAAAATTTGCATT 78194 >seq821 Length=42298 Score = 86.0 bits (94), Expect = 5e-12 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 33913 CGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGCTCG 33972 || || |||||||| | |||||| || ||||||||||||||||| || ||| ||| | Sbjct 35986 CGTAGAACCAGATGTAACGTGCTTTCTTTCTGAATGTTGTAATCCGCTAATGTTCGACCA 35927 Query 33973 TCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCC 34014 || |||||||| || || ||||| || || ||||| || ||| Sbjct 35926 TCTTCCAATTGTTTCCCAGCAAAAATGAGACGCTGTTGGTCC 35885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397044277203490